| Gene ID | Annotation | Chromosome | Start | End | Strand |
|---|---|---|---|---|---|
| CsqKR_Scaf172_3.25 | PSEUDOURIDINE SYNTHASE-RELATED | chr8 | 21119163 | 21124087 | + |
| CDS | |||||
| CsqKR_Scaf172_3.25 | |||||
| Transcript |
| CsqKR_Scaf172_3.25 |
| Protein |
| CsqKR_Scaf172_3.25 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF01509 | TruB_N | TruB family pseudouridylate synthase (N terminal domain) | Family | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR002501 | Domain | Pseudouridine synthase II, N-terminal | Interproscan |
| IPR020103 | Homologous_superfamily | Pseudouridine synthase, catalytic domain superfamily | Interproscan |
| IPR039048 | Family | Mitochondrial pseudouridylate synthase Trub2 | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR13195 | PSEUDOURIDINE SYNTHASE-RELATED | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0001522 | Biological Process | pseudouridine synthesis | Interproscan |
| GO:0003723 | Molecular Function | RNA binding | Interproscan |
| GO:0006396 | Biological Process | RNA processing | Interproscan |
| GO:0009451 | Biological Process | RNA modification | Interproscan |
| GO:0009982 | Molecular Function | pseudouridine synthase activity | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
| 1. Expression trend for CsqKR_Scaf172_3.25 global RNA-seq network |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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