Detailed information of CsqKR_Scaf172_12.16 in Chrysomallon squamiferum Gene info
Gene IDAnnotationChromosomeStartEndStrand
CsqKR_Scaf172_12.16VOLTAGE-DEPENDENT CALCIUM CHANNEL TYPE A SUBUNIT ALPHA-1chr82196571821994653-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00520Ion_transIon transport proteinFamilyInterproscan
PF08763Ca_chan_IQVoltage gated calcium channel IQ domainDomainInterproscan
PF16905GPHHVoltage-dependent L-type calcium channel, IQ-associatedFamilyInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR002048DomainEF-hand domainInterproscan
IPR005821DomainIon transport domainInterproscan
IPR014873DomainVoltage-dependent calcium channel, alpha-1 subunit, IQ domainInterproscan
IPR031649DomainVoltage-dependent L-type calcium channel, IQ-associated domainInterproscan
IPR050599FamilyVoltage-dependent calcium channel alpha-1 subunitInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR45628VOLTAGE-DEPENDENT CALCIUM CHANNEL TYPE A SUBUNIT ALPHA-1Interproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0005216Molecular Functionmonoatomic ion channel activityInterproscan
GO:0005509Molecular Functioncalcium ion bindingInterproscan
GO:0005891Cellular Componentvoltage-gated calcium channel complexInterproscan
GO:0006811Biological Processmonoatomic ion transportInterproscan
GO:0007268Biological Processchemical synaptic transmissionInterproscan
GO:0008331Molecular Functionhigh voltage-gated calcium channel activityInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0055085Biological Processtransmembrane transportInterproscan
GO:0098703Biological Processcalcium ion import across plasma membraneInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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Expression pattern
 1. Expression trend for CsqKR_Scaf172_12.16 global RNA-seq network
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