Gene detail

Detailed information of CsqKR_Scaf166_3.42 in Chrysomallon squamiferum Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
CsqKR_Scaf166_3.42	ARSENITE METHYLTRANSFERASE	chr8	14924495	14938721	+

Gene Structure

More details in Jbrowse Sequence

CDS

CsqKR_Scaf166_3.42

ATGGCTGCCACAGATGATAATGTCAGAGATGCTGTCAGAGATTATTACGGAAAACGGTTACAATCGTCCAAGGATCTTAAGACAAACACTTGCAAGATAGCGCCATCTGGTTTACCAAAACACATCCGGGATGCCATTGTTGATGTCCATGATGAAGTTGTTAAAAGGTATTATGGGTGTGGTCTGGTGATACCTGAGAAGTTGGAAGGGGCAAGGGTTTTGGATCTGGGTAGTGGGTCAGGAAGAGATTGTTTTGCTATCAGTAAGCTGGTGGGAGAAAATGGATATGTGGTGGGTGTTGATATGACAGATGGGCAGCTTGAAATAGCCAGAAATTATATAGATTATCACAAGGAAAAATTTGGCTACAAGGAACCAAATGTGGAGTTTGTAAAAGGATATATAGAAAAACTACCAGATGCTGGTCTCAAAGAAAATAGTTTTGATATTGTGATATCCAACTGTGTGGTGAATCTGTCTCCAGATAAACTTGCAGTACTGAGGGGAGCCTACAAGGTGCTGAAGGTAGGTGGTGAGGTGTATTTCAGTGACATCTATTGTGATTGCCACCTTTCAGAAACAGCCAGAAAACATGAAGTCTTGTGGGGTGAATGTTTGTCTGGTGCTCTGTATTGGAAGGAAATTTTTGATTTGGCTAAAGAAGTTGGATTCAGTACTCCTAGACTGGTTTCTGTATCACCAGTTCCTGTTACACAACCAGAGTTCATAGAAGTCCTAGGTGAGGCTCAGTTTGTGTCAGTCACATACAGATTGTTCAAGTTACCAGAGAAGAAAGTAAAAGCTCGCAAAGTCATCTACAATGGTAAAATACTAGGATATGAAGATGAACTGAAGTTTGATTTCAGAGTAACATTCAAGAAAGGAGATGCTGTCGCTGTAGACAGTGAACTTGCCACCATCTTGGACAGTTCAAGATACAAGGACGAGTTTGATTTCCAGCCAGAAGGCAGTCTTGATTACTATGGAAAAGAGCTGAAGACAACAAGCGATTTGAAGACTCCAACTTGCAAGACTCCAACAGTGGCCTTGCCAAAGCACATCCGCGAAGCTCTTGCTGATGTCCACGAAGAAGTTGTGAAAAAGTATTATGGGTGTGGTCTGGTGATACCTGAGAAGCTGGAAGGGGCGAGGATTTTGGATCTGGGTAGTGGGTCAGGAAGAGACTGTTTTGCTATCAGTAAGCTGGTGGGAGAAAATGGATATGTGGTGGGTGTTGATATGACAGATGAACAGCTTGAGGTGTCAAGGAAGTACATAGATTACCACAAAGAGAAGTTTGGATACAAGAAACCTAATGTTGAGTTTGTGAAAGGATACATTGAGAAACTCACAGAGGCTGGACTCAAAGAAAACTCATTTGATGTTGTGATATCAAACTGCGTTATCAACCTTTCACCTGACAAGAAATCAGTGCTAAGAGAAGCCTACAAAGTGCTCAAGGTTGGAGGGGAACTGCATTTCAGTGACATCTACTGTGATCAGGATTTGCCACAGTCAGTGAGAAAACACAAAGTGCTGTGGGCTCTGTGCTGGAAGGACATTTTTGAACTTGCCAAGGAGGTTGGATTCAGTACACCCAGACTTATTGCCTTAGTTCCAGTTCCAATCACTAAACCAGAATTCCAGCAGGTTCTAGGAGATGCAAAGTTTCTGTCTGCAGAGTATCGACTGTTCAAGTTACCAGAGAAGAAAGTGAAAGCTCGTAAAGTCATCTACAATGGTGAAATCCTGGGATATGAAGACAAACTGAAGTTTGATTTCAGAGTAACATTCAAGAAAGGAGATGCTGTCGCTGTAGACAGTGAACTTGCCACCATCTTGGACAGTTCCAGATACAAGGACGAGTTTGATTTCCAGCCAGAAGGCAGCTTGTGCTGTGAACCCAAGATTCAGATTGACGTAGATCCATTCGAGTACATGGAAATCATGAAGAAAGAAGGCACTCTGCCTGCAACCCGTGCATGCTGTAGTTAA

Transcript

CsqKR_Scaf166_3.42

CGTGAGTTGACTGTGGCCTTCAGATTTGATCTAGTTATTTCAGTGTAGGCCAGCTGCACTTGACAGTCAGATCAATAGATGAAGCAACAGTTGTTAAAAAGCAAGCTGTTTTGAAATAGCAGGTAGATACAGCTTACCTTAGCTAGTGGGACTTCTACAGGAGAGAAAAAACTAAGATGGCTGCCACAGATGATAATGTCAGAGATGCTGTCAGAGATTATTACGGAAAACGGTTACAATCGTCCAAGGATCTTAAGACAAACACTTGCAAGATAGCGCCATCTGGTTTACCAAAACACATCCGGGATGCCATTGTTGATGTCCATGATGAAGTTGTTAAAAGGTATTATGGGTGTGGTCTGGTGATACCTGAGAAGTTGGAAGGGGCAAGGGTTTTGGATCTGGGTAGTGGGTCAGGAAGAGATTGTTTTGCTATCAGTAAGCTGGTGGGAGAAAATGGATATGTGGTGGGTGTTGATATGACAGATGGGCAGCTTGAAATAGCCAGAAATTATATAGATTATCACAAGGAAAAATTTGGCTACAAGGAACCAAATGTGGAGTTTGTAAAAGGATATATAGAAAAACTACCAGATGCTGGTCTCAAAGAAAATAGTTTTGATATTGTGATATCCAACTGTGTGGTGAATCTGTCTCCAGATAAACTTGCAGTACTGAGGGGAGCCTACAAGGTGCTGAAGGTAGGTGGTGAGGTGTATTTCAGTGACATCTATTGTGATTGCCACCTTTCAGAAACAGCCAGAAAACATGAAGTCTTGTGGGGTGAATGTTTGTCTGGTGCTCTGTATTGGAAGGAAATTTTTGATTTGGCTAAAGAAGTTGGATTCAGTACTCCTAGACTGGTTTCTGTATCACCAGTTCCTGTTACACAACCAGAGTTCATAGAAGTCCTAGGTGAGGCTCAGTTTGTGTCAGTCACATACAGATTGTTCAAGTTACCAGAGAAGAAAGTAAAAGCTCGCAAAGTCATCTACAATGGTAAAATACTAGGATATGAAGATGAACTGAAGTTTGATTTCAGAGTAACATTCAAGAAAGGAGATGCTGTCGCTGTAGACAGTGAACTTGCCACCATCTTGGACAGTTCAAGATACAAGGACGAGTTTGATTTCCAGCCAGAAGGCAGTCTTGATTACTATGGAAAAGAGCTGAAGACAACAAGCGATTTGAAGACTCCAACTTGCAAGACTCCAACAGTGGCCTTGCCAAAGCACATCCGCGAAGCTCTTGCTGATGTCCACGAAGAAGTTGTGAAAAAGTATTATGGGTGTGGTCTGGTGATACCTGAGAAGCTGGAAGGGGCGAGGATTTTGGATCTGGGTAGTGGGTCAGGAAGAGACTGTTTTGCTATCAGTAAGCTGGTGGGAGAAAATGGATATGTGGTGGGTGTTGATATGACAGATGAACAGCTTGAGGTGTCAAGGAAGTACATAGATTACCACAAAGAGAAGTTTGGATACAAGAAACCTAATGTTGAGTTTGTGAAAGGATACATTGAGAAACTCACAGAGGCTGGACTCAAAGAAAACTCATTTGATGTTGTGATATCAAACTGCGTTATCAACCTTTCACCTGACAAGAAATCAGTGCTAAGAGAAGCCTACAAAGTGCTCAAGGTTGGAGGGGAACTGCATTTCAGTGACATCTACTGTGATCAGGATTTGCCACAGTCAGTGAGAAAACACAAAGTGCTGTGGGCTCTGTGCTGGAAGGACATTTTTGAACTTGCCAAGGAGGTTGGATTCAGTACACCCAGACTTATTGCCTTAGTTCCAGTTCCAATCACTAAACCAGAATTCCAGCAGGTTCTAGGAGATGCAAAGTTTCTGTCTGCAGAGTATCGACTGTTCAAGTTACCAGAGAAGAAAGTGAAAGCTCGTAAAGTCATCTACAATGGTGAAATCCTGGGATATGAAGACAAACTGAAGTTTGATTTCAGAGTAACATTCAAGAAAGGAGATGCTGTCGCTGTAGACAGTGAACTTGCCACCATCTTGGACAGTTCCAGATACAAGGACGAGTTTGATTTCCAGCCAGAAGGCAGCTTGTGCTGTGAACCCAAGATTCAGATTGACGTAGATCCATTCGAGTACATGGAAATCATGAAGAAAGAAGGCACTCTGCCTGCAACCCGTGCATGCTGTAGTTAAACGAGATGTCACGTTTTGACAACAAGGACATAACACACTCACAATACAGACAGATACTGCCCAGGAATTGTATCTGCCTTTTGCCATTACTAATATCACATTCTTTTACTGTCGACCATTTTAAATACTAGAATAACCGAGATTGCAAACGAAATAACCAATGTTACATGTTGGTTTTTGAAAACAAAGAAACAATTTAATGATTTGTTAATAAATAAATCTGTGGATGCATGCATATCTGTCTAACAATGCCATTATTTTAATTTTGTTACTAATATTAAGTATCAAATGAAATTTTTTTTTTTTTTGACTAATAACTTTATTTGAGACTACCACACTATGGACTATTTAAATCTAATTAATTACCTGTCATATAAGATATGCAAAGTACAGATTTCTATGGCACAAATAACTGATAATAATGATCATCTATCTGATTCTAACCAGATTGCAAATTAGTTTTTATTCTAGATTACATCTTGATACAAATAAAATATATTCTAGATTTTATTTCAAATTAAGCTGGAATAATGGGCTACTCTCTGGATTCCCTGGATTACATAAAGTGCAAGCAGGCAGAAAACTGGGCTACGTATATATAAAAATGTTAATTTTTCCAAAATATTCTCTCCACTTTGCTGCTGTGTGTTTGTAAAACAAATAAACAAGACTTTATCAATGGACTATATTTTAAACGAGACATAAAGAAATAAGAAAAAAACAATAAAATTAAAACAACAACAAAAACTAAAATTGCTTTTGTTCAACTTTAATGATTGAGTACAGGCACAATAGCATTACAAAAACCTTTCCAAAATTTGATACATATGATTTTTTTTTTTTAAATAAATTTATGTTATAGTTTATAAATAAGCCATCAGTACTGTTATCTATAATTTTTGAAACACAAATAAATAAATAATGTTTGTGAAGAACTGTGATAATTTCATTTTGTTTTGTTTTCTAATTAACTTCATAATAATTTTATCCCACCTTTTTTTTTGGTAGACTGAGAAACATAATTAGTATTTTTATTATTTTATGTTTTTTAGAAAATTATTGCTGCACAGTTGTTTTTATTTTTACACTAAACAGAGCTTTTTATCAAATTTAATTGTGCTTCAGTTGTTACGATTTAAAGCTTGTGTGTTGTTAATGACAATTTTACACAAATTACATGTATATGCAATAAAATGTAAATTTATAGCACTTGTACTGTTTTACCCTTCACTTAGATGTTCATATTTCTAGAAACGTTTGCAGATTACGTTTAATAATAATAATAATAATATAACAAAAATGATAAAAAAAAGTAGCTAAAAGAAGAATAAATTAAAAAAAGAAAACAAAAAAAC

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13847	Methyltransf_31	Methyltransferase domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR025714	Domain	Methyltransferase domain	Interproscan
IPR026669	Family	Arsenite methyltransferase-like	Interproscan
IPR029063	Homologous_superfamily	S-adenosyl-L-methionine-dependent methyltransferase superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR43675	ARSENITE METHYLTRANSFERASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005829	Cellular Component	cytosol	Interproscan
GO:0008168	Molecular Function	methyltransferase activity	Interproscan
GO:0009404	Biological Process	toxin metabolic process	Interproscan
GO:0018872	Biological Process	arsonoacetate metabolic process	Interproscan
GO:0030791	Molecular Function	arsenite methyltransferase activity	Interproscan
GO:0030792	Molecular Function	obsolete methylarsonite methyltransferase activity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-

Expression pattern

1. Expression trend for CsqKR_Scaf166_3.42 global RNA-seq network