Gene detail

Detailed information of CsqKR_Scaf159_10.8 in Chrysomallon squamiferum Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
CsqKR_Scaf159_10.8	FATTY ACID SYNTHASE	chr15	1745006	1747597	-

Gene Structure

More details in Jbrowse Sequence

CDS

CsqKR_Scaf159_10.8

ATGATGGAAATCTCAGTGCTGCATTTATCTAATGACAACAGATTGATGACTGTGCGAGTATCCGAAGAGTCACTACTTCGATCAGATGGAATCTACATTGTAGTGGGTGGTCTAACAGGTCTTGGCTGGGAATCTGTCCGATTTCTTGCACAAAGAGGTGCCGGCGCAGTCGTCACAATAAATCGAAGAATGGTGCAGAGGGAAAAAGTGGTTGAAATAGGAAAGCTTGAAAAAGCACATAACTGTCAGATTATCACCCTCCAGGCAGATGTTACTAATATTACATCGTTAAAAAAAGTTCTGAGTGAAGTTGACTATAAATTTCCCTCAAAACTGCTAAAAGGAGTTATCTTTGGTGCGGCTGTACTTGATGATAAAATGTTCATCAATATGTCAGAAGAAACATTTTTGAAGGTTGCTTCTCCCAAAATACAAGGTGCTTGGAATATGCATCTTCTTACACAAAACAAACCTCTTGACTTTTTTATCATGCATTCCTCCATAACAGCAGTTTTAGGAAATCCAGGTCAGTCCAATTATGGAGCTGCCAATGCTTTCCAGGATTCATTAGCACAGAAACGTAGACTGTCTGGACTTGCTGGTCAGAGTATTAACTGGGGACCTCTGAACCTTGGTTTGCTTCAAGATAAACCTGCTGTTTTGGAAGCCTTGAGAAGCCAAGGATACATTCCACTTAGTATTGATGAGATACACAAGTGTCTTCTGGCCGCACTCATGCTGGACAAACCTGCAGTTGTGGCAGCCAAATTTAACTCTATTCAATTGTCCAACAGCATAATGAAGGAAAAGAACACAGCTCTGGAATTCAAATTAAGACCCATCATTGAAATACCAACATCAGAAATGACACAAAATACTACAATTAAAAGCAAACTAACTTTTGATCTAGAACAAATTAAAGCGTCTGATCTTGAAACAAGACGTCAATTAGTTCAAGAGTTTATCACTGAATTACTGGCAGATGTCTTAAGCTGTGATCAAAGCCTTCTTGAACTGGATAAAGGAGTGGAAGACCTGGGACTGGACTCAATGCAGGCAATGACCTTCAGTAATCAAATATATCAAACATTTGAAATAAGGATCACACCAAATGGTCTACTGCAACAAAACCTCTCAGCTAATGAAATTACAGACATGATTAACTCCAAACTGTTGATGGCAAATAAAACAGAAATACCAAATGTTTCCTTGCCAGTTACGAAAGAGACACTTTCATATATGGAACATACTTTCTACAAGATATACTGCAGAGATCCTGCTCATCCAAGTTTGTATTATGTGAATGAGATATTACTGCCTGTATCAGTAGCTGACCCAAAACTGTGGGAGAAAATAACGAATCAACTTATTTCACGACATGAAGTTCTGAGAACAACATTTGTGAAAGTACCAGCCAGTGAAAACATTAGATGGAATGTAAAAAGAAAGATTTTTGACGATGGAATGAAACTAGACTTCAGAATATTAAAAGCAGACGATTCTGATGTGATAGAAAAGAACACACGAGAAGCTTTTCATTTAGAGACTCAAGGTCCAGTTCGGTTCATTTTCATTCAAGGAGAAAAATGCCACCTCAGAACTGTTTACAACAGTATTTGTTTTGATATGCAAGGAGTTGCATCAATTTTAAAAGATATGGTGGATATCTTTCTTTTCAACAAACATAATATGCCACTATCTGATTTGAAAACTGTAGGAGGAAGTTTGATAGTGATTGAAATGGAAAAAGTGCTGCATGAAAGAGGTTTTCAACTGAAAGAATTTTGGAAACACTTCCTTGAAGAAGATATACCAGCGATTATTTTAGGTAAAACAAGTCAGTCACCTGAAGCAAAATCAGACGTATACAAATCTCATAAAGAAACTGTACGTCCTGAACTCTGTGATGCACTGCGTAACTTATCAAAGACTAAAGGATTAACCATTTACAGGCTAATTACCAGCATCTATCAACTGCTTCTACATCTCATCACCAAACAGGCCACAGTGGCAATTTCAACAACAGTAGATATCAAGCAACACGTTCCAAATGCTGCTCATGCTGTTGGCCTTGGAACGAACTACATTCCTCTTGTTGCAAAATTTCCATCAGATAAAGTCAGTATTGAAGAATTTCTGAAAGTGAACAAAACAGCTCTTCAGAACTCAGTTGATCATTGTGTGTGTCCCACAGATATCATTGGTGAATTGGTTGGTCCTGAAAAACTCAAAAACATTGTCAGAAACAAGATTGTAATTGTTGAAGATGAATTTGTAGCACCTTTATTACAAAAAGCAGATGTGGCTGGATATGGTTTTGAAATAACACAATCAGGAGATCTGGGAACCCACACAGAAACTCAGCTTAGTCTCTGGAACAGAACAAAATCAAAACAAATGAGTCTTGAACTGATATATAATTCAAATAACATGTCCAGTGATTATGCACAGAACATGATAAGTTCGATGTTGGAAATAGCTGATAAAATCACTACTGATAGTTCCACAACAATCGCAGATCTAAAGCAAATAAAATCTGTTAAAAATTTGATATATTTCAGTGAAAAAGACACCAAAGGAAGTAAAACATAA

Transcript

CsqKR_Scaf159_10.8

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00550	PP-binding	Phosphopantetheine attachment site	Domain	Interproscan
PF00668	Condensation	Condensation domain	Family	Interproscan
PF08659	KR	KR domain	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001242	Domain	Condensation domain	Interproscan
IPR009081	Domain	Phosphopantetheine binding ACP domain	Interproscan
IPR013968	Domain	Polyketide synthase, ketoreductase domain	Interproscan
IPR023213	Homologous_superfamily	Chloramphenicol acetyltransferase-like domain superfamily	Interproscan
IPR036291	Homologous_superfamily	NAD(P)-binding domain superfamily	Interproscan
IPR036736	Homologous_superfamily	ACP-like superfamily	Interproscan
IPR050091	Family	Polyketide and Nonribosomal Peptide Biosynthesis Enzymes	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR43775	FATTY ACID SYNTHASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003824	Molecular Function	catalytic activity	Interproscan
GO:0004312	Molecular Function	fatty acid synthase activity	Interproscan
GO:0006633	Biological Process	fatty acid biosynthetic process	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-

Expression pattern

1. Expression trend for CsqKR_Scaf159_10.8 global RNA-seq network