| Gene ID | Annotation | Chromosome | Start | End | Strand |
|---|---|---|---|---|---|
| CsqKR_Scaf14_15.13 | PROTEIN VASCULAR ASSOCIATED DEATH 1, CHLOROPLASTIC | chr9 | 25704704 | 25720260 | + |
| CDS | |||||
| CsqKR_Scaf14_15.13 | |||||
| Transcript |
| CsqKR_Scaf14_15.13 |
| Protein |
| CsqKR_Scaf14_15.13 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00566 | RabGAP-TBC | Rab-GTPase-TBC domain | Family | Interproscan |
| PF02893 | GRAM | GRAM domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR000195 | Domain | Rab-GAP-TBC domain | Interproscan |
| IPR002048 | Domain | EF-hand domain | Interproscan |
| IPR004182 | Domain | GRAM domain | Interproscan |
| IPR011992 | Homologous_superfamily | EF-hand domain pair | Interproscan |
| IPR011993 | Homologous_superfamily | PH-like domain superfamily | Interproscan |
| IPR018247 | Binding_site | EF-Hand 1, calcium-binding site | Interproscan |
| IPR035969 | Homologous_superfamily | Rab-GAP-TBC domain superfamily | Interproscan |
| IPR036014 | Domain | TCB1D9/TCB1D9B, PH-GRAM domain 1 | Interproscan |
| IPR036017 | Domain | TCB1D9/TCB1D9B, PH-GRAM domain 2 | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR47666 | PROTEIN VASCULAR ASSOCIATED DEATH 1, CHLOROPLASTIC | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0005509 | Molecular Function | calcium ion binding | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
| 1. Expression trend for CsqKR_Scaf14_15.13 global RNA-seq network |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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