| Gene ID | Annotation | Chromosome | Start | End | Strand |
|---|---|---|---|---|---|
| CsqKR_Scaf147_13.8 | U3 SMALL NUCLEOLAR RIBONUCLEOPROTEIN PROTEIN IMP4 | chr6 | 35281570 | 35286365 | - |
| CDS | |||||
| CsqKR_Scaf147_13.8 | |||||
| Transcript |
| CsqKR_Scaf147_13.8 |
| Protein |
| CsqKR_Scaf147_13.8 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF04427 | Brix | Brix domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR007109 | Domain | Brix domain | Interproscan |
| IPR044281 | Family | U3 snoRNP protein/Ribosome production factor 1 | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR22734 | U3 SMALL NUCLEOLAR RIBONUCLEOPROTEIN PROTEIN IMP4 | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0000460 | Biological Process | maturation of 5.8S rRNA | Interproscan |
| GO:0000470 | Biological Process | maturation of LSU-rRNA | Interproscan |
| GO:0005730 | Cellular Component | nucleolus | Interproscan |
| GO:0006364 | Biological Process | rRNA processing | Interproscan |
| GO:0019843 | Molecular Function | rRNA binding | Interproscan |
| GO:0030687 | Cellular Component | preribosome, large subunit precursor | Interproscan |
| GO:0042134 | Molecular Function | rRNA primary transcript binding | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
| 1. Expression trend for CsqKR_Scaf147_13.8 global RNA-seq network |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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