Detailed information of CsqKR_Scaf138_10.31 in Chrysomallon squamiferum Gene info
Gene IDAnnotationChromosomeStartEndStrand
CsqKR_Scaf138_10.31GLUTAMATE-RICH WD REPEAT-CONTAINING PROTEIN 1chr152386759123870950+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
Ubiquitin FamilyUBD|Other|Beta-prp
Ubiquitin FamilyE3|E3 adaptor Cullin RING|CDC20
Ubiquitin FamilyE3|E3 adaptor Cullin RING|DWD

Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00400WD40WD domain, G-beta repeatRepeatInterproscan
PF12265CAF1C_H4-bdHistone-binding protein RBBP4 or subunit C of CAF1 complexRepeatInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR001680RepeatWD40 repeatInterproscan
IPR015943Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan
IPR019775Conserved_siteWD40 repeat, conserved siteInterproscan
IPR020472RepeatG-protein beta WD-40 repeatInterproscan
IPR022052DomainHistone-binding protein RBBP4, N-terminalInterproscan
IPR036322Homologous_superfamilyWD40-repeat-containing domain superfamilyInterproscan
IPR051972FamilyGlutamate-rich WD repeat-containingInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR45903GLUTAMATE-RICH WD REPEAT-CONTAINING PROTEIN 1Interproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005730Cellular ComponentnucleolusInterproscan
GO:0042254Biological Processribosome biogenesisInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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Expression pattern
 1. Expression trend for CsqKR_Scaf138_10.31 global RNA-seq network
TOP