| Gene ID | Annotation | Chromosome | Start | End | Strand |
|---|---|---|---|---|---|
| CsqKR_Scaf127_8.49 | WERNER HELICASE-INTERACTING PROTEIN 1 FAMILY MEMBER | chr3 | 19739689 | 19744146 | + |
| CDS | |||||
| CsqKR_Scaf127_8.49 | |||||
| Transcript |
| CsqKR_Scaf127_8.49 |
| Protein |
| CsqKR_Scaf127_8.49 |
| Gene family | Subfamily |
|---|---|
| Ubiquitin Family | UBD|ZnF|UBZ |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00004 | AAA | ATPase family associated with various cellular activities (AAA) | Domain | Interproscan |
| PF12002 | MgsA_C | MgsA AAA+ ATPase C terminal | Domain | Interproscan |
| PF16193 | AAA_assoc_2 | AAA C-terminal domain | Family | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR003593 | Domain | AAA+ ATPase domain | Interproscan |
| IPR003959 | Domain | ATPase, AAA-type, core | Interproscan |
| IPR006642 | Domain | Rad18, zinc finger UBZ4-type | Interproscan |
| IPR008921 | Homologous_superfamily | DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal | Interproscan |
| IPR021886 | Domain | MgsA AAA+ ATPase C-terminal | Interproscan |
| IPR027417 | Homologous_superfamily | P-loop containing nucleoside triphosphate hydrolase | Interproscan |
| IPR032423 | Domain | AAA C-terminal domain | Interproscan |
| IPR051314 | Family | AAA ATPase RarA/MGS1/WRNIP1 | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR13779 | WERNER HELICASE-INTERACTING PROTEIN 1 FAMILY MEMBER | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0000731 | Biological Process | DNA synthesis involved in DNA repair | Interproscan |
| GO:0003677 | Molecular Function | DNA binding | Interproscan |
| GO:0005524 | Molecular Function | ATP binding | Interproscan |
| GO:0005634 | Cellular Component | nucleus | Interproscan |
| GO:0006260 | Biological Process | DNA replication | Interproscan |
| GO:0006261 | Biological Process | DNA-templated DNA replication | Interproscan |
| GO:0006281 | Biological Process | DNA repair | Interproscan |
| GO:0008047 | Molecular Function | enzyme activator activity | Interproscan |
| GO:0016887 | Molecular Function | ATP hydrolysis activity | Interproscan |
| GO:0017116 | Molecular Function | single-stranded DNA helicase activity | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
| 1. Expression trend for CsqKR_Scaf127_8.49 global RNA-seq network |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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