| Gene ID | Annotation | Chromosome | Start | End | Strand |
|---|---|---|---|---|---|
| CsqKR_Scaf127_20.14 | SYNTROPHIN | chr3 | 20892028 | 20898959 | + |
| CDS | |||||
| CsqKR_Scaf127_20.14 | |||||
| Transcript |
| CsqKR_Scaf127_20.14 |
| Protein |
| CsqKR_Scaf127_20.14 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00169 | PH | PH domain | Domain | Interproscan |
| PF00595 | PDZ | PDZ domain | Domain | Interproscan |
| PF18012 | PH_17 | PH domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR001478 | Domain | PDZ domain | Interproscan |
| IPR001849 | Domain | Pleckstrin homology domain | Interproscan |
| IPR011993 | Homologous_superfamily | PH-like domain superfamily | Interproscan |
| IPR015482 | Family | Syntrophin | Interproscan |
| IPR036034 | Homologous_superfamily | PDZ superfamily | Interproscan |
| IPR041428 | Domain | Syntrophin, split Pleckstrin homology (PH) domain | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR10554 | SYNTROPHIN | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0005198 | Molecular Function | structural molecule activity | Interproscan |
| GO:0005515 | Molecular Function | protein binding | Interproscan |
| GO:0005622 | Cellular Component | intracellular anatomical structure | Interproscan |
| GO:0016010 | Cellular Component | dystrophin-associated glycoprotein complex | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
| 1. Expression trend for CsqKR_Scaf127_20.14 global RNA-seq network |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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