Gene detail

Detailed information of CsqKR_Scaf127_11.9 in Chrysomallon squamiferum Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
CsqKR_Scaf127_11.9	SPIRE	chr3	19959785	19964106	-

Gene Structure

More details in Jbrowse Sequence

CDS

Transcript

CsqKR_Scaf127_11.9

GTTGTTTATTATTATTTTGTGACTGTTATTTTTGTGTCAGAGGAAGTGGTTATACTTGGTTACATGATTGGTAACAGTGAAGTTGTTTTTGACAGAAACGCTGGCAGAATCCAATAGAATGTTTGAACTTGACCTTGGAAGAGGTGACTCACATCAGATCAGTTCTCACAAAGGCTGAACTGGAATCACTGCTCACTCAGCCCACACTCTACTCACAGGTGTCCAAGGGAAAGCTCTGTTTCACATGTAAGAAGAGCAAATTTACAATTTTTGGAGAGTGGGGTACAAAGTGCAAGTTCTGCAAGAGAACAGTGTGCAGTAAATGTCTCAGAAAGATGCACGTCCCAACAGAACATTTCAAGAATATTCCTGTGTACACACTCAGTCCCACACCCATCAGCCCTGAGACCAAAGAAGCCATTCAGAGGTTCATCAACTCTGCTCCTGCTGGTTCAGCATCGGGCGAGGCACAGTCCACGGGTCGGGTGAACCTGGACAACAGACCCGGCAGGAAGAAAGCACTGCAGCGATCCCAGTCGATGCTGGTGAAACCCTCGCCCGCGGTGGAGAACAAAGGCCCCCTCATGAACATCTGCTGTGACTGTAAAGCATTAGTGACGGAAATTGTCCGCGCAGGCAGAACTTCGATTTCTCTCATTAACCAGAACAAAGTTCACTCTCCGGACTCTGCAGCCAAGTGAACAAAGTGAATGGGGTTTTTTTTGTGATTGATAGCGGATTGTGATACAGACTTCCACATTAAAGGTGAACTACACCCACACACAAACAGATTCATGGAAGTTCAGAATTGTGAATTATATTTCATGTACCGTTTTGAGGACTGTTTATTTATTTTTTATTTTTTGGACAAAACAACAGACGTGTAAAAAAAATGTTTATAATTATTAAAAAGTAAATATTTTTGACGATTATTTACTTGAGAAATCCAGGTGAGGAAGTTACAGGTGTGAAAAAAAAATGAAGAGTTATTGTTATATATGGACCACACCTAAGTAAAGTTACTAACCATAGACAGCAGCTTGGATTGTGAAACTGTTTTTAACTTTTGTTTTTCTCTTTATTTTATTTTTTTTTTGTCTTTACTTTGAATATCTTATTAGGCTTTATCAGATCTATAACTTTATTTAATGTGCTGTCTTGAATCTCATGATTTTTAAAACCATCTTGTTATAACTGATAATTTGAAGATAGAAAAAAACATTAGCAAGAAATGTCTCAGATCATTGTGATTGTAAAACTATGTCTCCCTTCAGTGTTCAATTATCAGATCCCCTCAGTATACTTTACTGATAGCAGAAGTTAAAAAATAAAATTGACAAGTTTGAAAATAATCAGTGTGTTAGTGGCAATACATACTATTCAGATGACATTTGTAGTGAAGCTTGAAAAGCTTTTAAATTAGGAGTGGAAAAATATTTAAGAAACAGTGCATAGGATTAAATGGTTTGTGAAAGTTAAAAAAACAGATTTTCAACTATTTCACTCTGGAATACAGGATCTTGTAAGTTTCAGGTTTTGAAAATGTTTTAAAATGAAATTAAATAATGACAGTTAATTTCATCATGATGAGTTGAAATGATCAAATGTTTTAAAACTTTTAGCTGGTACATTAAGAACCAGCTGTGGTTGTGATATGTTTTTCTCTCACCTATAATCATCATACAGTTGTCTGTTTTCACTGGTTTGTCCACTACGCTAAGCTGTAAATCTACACGATACCTACAAAGACCAAGACTAACCATGTTACATTAGATACCTTTACACTTCTATCTGAAAGTAATAACCTTTAATACATTAACTGCTAATATTTTTCTAATACATTACATATATATATTGTTTGCCTTGTTAATAGATCTGAACTGGGCAAGCAGAATGGCCGTAGCACATTTTAACCTGGAATGGGTAACATTAACTGATGATGTCGCTGAAAACAAACAATAATGATCTTTATTTCTTCCAACTTCAGTTCACTGATCTCTTTAAACAACATAGTCTTAGTAGGTTTGAGCATTGTGTCTCTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTAAATTAGTCTTTCAACCAGAATTTTTAAAGCTGGTGATTCC

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
--	--	--	--	--

InterPro

InterPro term	Type	Description	Source
IPR029901	Family	Protein Spire	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR21345	SPIRE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003779	Molecular Function	actin binding	Interproscan
GO:0005938	Cellular Component	cell cortex	Interproscan
GO:0016192	Biological Process	vesicle-mediated transport	Interproscan
GO:0030041	Biological Process	actin filament polymerization	Interproscan
GO:0030659	Cellular Component	cytoplasmic vesicle membrane	Interproscan
GO:0036089	Biological Process	cleavage furrow formation	Interproscan
GO:0040038	Biological Process	polar body extrusion after meiotic divisions	Interproscan
GO:0045010	Biological Process	actin nucleation	Interproscan
GO:0046907	Biological Process	intracellular transport	Interproscan
GO:0048193	Biological Process	Golgi vesicle transport	Interproscan
GO:0051295	Biological Process	establishment of meiotic spindle localization	Interproscan
GO:0051639	Biological Process	actin filament network formation	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-

Expression pattern

1. Expression trend for CsqKR_Scaf127_11.9 global RNA-seq network