Gene detail

Detailed information of CsqKR_Scaf119_6.20 in Chrysomallon squamiferum Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
CsqKR_Scaf119_6.20	PROTEIN ARGININE N-METHYLTRANSFERASE	chr6	41804414	41812805	+

Gene Structure

More details in Jbrowse Sequence

CDS

Transcript

CsqKR_Scaf119_6.20

ATGAGACCAGCATCATCAAAGCGGAGCATCAGTTTGCAGAACAGTAGATTTAATTCCGCGCCTCCAGTCCAATTTTCCAATATGGCGACAATTTTTGACAACGTGCTTCTGGCTACATTTTCAGATACAGAACAGTTTAAATGCCACTCGGAAGTTCCCCACAAACTCGAGATAGTGCAGAAAACAGAAAGTCTTGTTCTGAATTTATATTGTGAAAATGTTATTGCTTCAAGCATCACAGTGAACAGTGACACAGAACATTCACGACTTGGCAAGCAGTCTGTCTTGTTTACAAATGGAGATCATTCAACACTACTCAAGTTCCCTTCTATCCATGCAATGAAGAGTTTCCAGCACCAGGTGAAGGAGATGAAGAAGAACACAAAGTCTGTGTTTTCTAACAGAACAGATGAGGCATCTGCTGTCCAGTATTTTCAGTTCTATGGATACCTGTCCCAACAACAGAACATGATGCAGGATTACATTAGAACATCAACTTACCAGCGGGCAATGCTGGGAAACCTCTCAGACTTCCATGACAAGGTAGTGCTTGATGTGGGGGCAGGCTCAGGAATACTTTCGTTTTTTGCCATCCAGGCAGGTGCTAAGAAAGTGTACGCCATTGAGGCCAGCAACATGGCTGAACACTGCGAGAGACTTGTTCAGACAAACAACATGGGGAATCAGATTGTAGTGATTCCAGGTAAGGTGGAGGAGGTGCATGTACCTGAACAGGTGGACACAATTATCTCCGAGCCAATGGGTTACATGTTGTTCAACGAGCGAATGCTGGAAAGTTTTTTACACGCCAAGAAATGGCTTAAACCTGGAGGGAAAATGTTTCCGTCCCAGGGAGATTTGCACATAGCCCCATTCACTGACGAAGCTTTGTACATGGAGCAGTATTCCAAAGCCAATTTCTGGTATCAGGAGTCATTCCATGGGGTGAATCTTACAAGTCTGAGGACAGCAGCACTTGATGAGTATTTCCGTCAGCCGGTTGTAGACACATTTGACGTGAGAATATGTCTCGCGAAGCCAAACAAACATGAGGTAGATTTTCAGAAAGTAGATGAGACAGACTTGCATGTGATAGAGATTCCTCTCTCCTACGTCATCATGACATCAGGCATGGTGCATGGACTGGCGTTCTGGTTCGACGTCGCATTCTTCGGCACAGATGTACATGTATGGTTGTCGACTTCACCAACAGAGCCGCTGACTCACTGGTATCAGGTGAGATGTCTCATTCAGACTCCAGTTCTCGTCAAACAAGGTCAGACGCTCACTGGCAAAGTGACACTGAGATGTAACTGCAGACAAAGTTACGACGTCGACATTGAGTTGAACATCCCAGGAACAGCAAACAAATCTGTGAATACACTGGATCTGAAAAATCCATTCTTCAGGTACACAGGTCAACCCCCCCAGGCTCCACCTGGCATCAACAACTCATCAGCCACAGCGTCATACTGGAACTCAGTACAAGGACAGACGTATGTGAATGATTTGTTGAACGGAATGTCAGATCCACACCAGGCTCTCAACTTACAAGGAGCTGTACAAACAAACCTGATTGCAGTGTCTAACGTTGCCCCTATCAACCCGGGCAGTATTCCTAGTATAAGCAGCCAGGTAGCTAATAATTACGCTAACCGGACATCTATTGGTGGTGGAATTAGTCCAGTCAACTTCACTACAAACGCCCAGAGTGTTTTGACAGGAACTTCATCCAACTACCCAGTATGCAATCAGTTTATGATCGGAGATTACGCCATGCCAGGAAATCTAATTCTCACGTCTGGATACCAGAAGTCATAACAAATTTGTGAGCGTTGTGTAAAATAATCACGTGAACTATTTATAACACTTTCCTCAGGGTTCTGTGTGTGAGAGAGAGATGATGTGCAGCTTGATCAAAAACTCTGCACAGACTTAGTTCTTGTCATCAGTTGTGTTGTTAAAAAAAAAAAAAGAGTAGGATATGGAAATGTTGGATGATATATTAGTAATCACGATTTTTAATAACCAAAAACAAAACTCATTTTATTTTAAATATTTTAAAATTTTCCTCCTTTGAACTTATTTGTTCAAGGAGTTTTTGTTTCATTATTATTATTTTTATTTTTATTTTTATTATTATTATTATTATTAT

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF11531	CARM1	Coactivator-associated arginine methyltransferase 1 N terminal	Domain	Interproscan
PF13649	Methyltransf_25	Methyltransferase domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR011993	Homologous_superfamily	PH-like domain superfamily	Interproscan
IPR020989	Domain	Histone-arginine methyltransferase CARM1, N-terminal	Interproscan
IPR025799	Family	Protein arginine N-methyltransferase	Interproscan
IPR029063	Homologous_superfamily	S-adenosyl-L-methionine-dependent methyltransferase superfamily	Interproscan
IPR041698	Domain	Methyltransferase domain 25	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11006	PROTEIN ARGININE N-METHYLTRANSFERASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0016274	Molecular Function	protein-arginine N-methyltransferase activity	Interproscan
GO:0018216	Biological Process	peptidyl-arginine methylation	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-

Expression pattern

1. Expression trend for CsqKR_Scaf119_6.20 global RNA-seq network