| Gene ID | Annotation | Chromosome | Start | End | Strand |
|---|---|---|---|---|---|
| CsqKR_Scaf112_9.55 | PEPTIDOGLYCAN RECOGNITION PROTEIN | chr11 | 14137178 | 14138872 | + |
| CDS | |||||
| CsqKR_Scaf112_9.55 | |||||
| Transcript |
| CsqKR_Scaf112_9.55 |
| Protein |
| CsqKR_Scaf112_9.55 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF01510 | Amidase_2 | N-acetylmuramoyl-L-alanine amidase | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR002502 | Domain | N-acetylmuramoyl-L-alanine amidase domain | Interproscan |
| IPR006619 | Domain | Peptidoglycan recognition protein family domain, metazoa/bacteria | Interproscan |
| IPR015510 | Family | Peptidoglycan recognition protein | Interproscan |
| IPR036505 | Homologous_superfamily | N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR11022 | PEPTIDOGLYCAN RECOGNITION PROTEIN | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0008270 | Molecular Function | zinc ion binding | Interproscan |
| GO:0008745 | Molecular Function | N-acetylmuramoyl-L-alanine amidase activity | Interproscan |
| GO:0009253 | Biological Process | peptidoglycan catabolic process | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
| 1. Expression trend for CsqKR_Scaf112_9.55 global RNA-seq network |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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