| Gene ID | Annotation | Chromosome | Start | End | Strand |
|---|---|---|---|---|---|
| CsqKR_Scaf112_9.54 | LEUCINE RICH REPEAT PROTEIN | chr11 | 14198141 | 14203303 | + |
| CDS | |||||
| CsqKR_Scaf112_9.54 | |||||
| Transcript |
| CsqKR_Scaf112_9.54 |
| Protein |
| CsqKR_Scaf112_9.54 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF14580 | LRR_9 | Leucine-rich repeat | Repeat | Interproscan |
| PF19252 | HIND | HIND motif | Motif | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR001611 | Repeat | Leucine-rich repeat | Interproscan |
| IPR003603 | Domain | U2A'/phosphoprotein 32 family A, C-terminal | Interproscan |
| IPR032675 | Homologous_superfamily | Leucine-rich repeat domain superfamily | Interproscan |
| IPR045347 | Conserved_site | HIND motif | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR18849 | LEUCINE RICH REPEAT PROTEIN | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0000398 | Biological Process | mRNA splicing, via spliceosome | Interproscan |
| GO:0005515 | Molecular Function | protein binding | Interproscan |
| GO:0046540 | Cellular Component | U4/U6 x U5 tri-snRNP complex | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
| 1. Expression trend for CsqKR_Scaf112_9.54 global RNA-seq network |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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