Gene detail

Detailed information of CsqKR_Scaf10_10.38 in Chrysomallon squamiferum Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
CsqKR_Scaf10_10.38	PROTEIN PHOSPHATASE 2C	chr15	28826504	28832775	-

Gene Structure

More details in Jbrowse Sequence

CDS

Transcript

CsqKR_Scaf10_10.38

GGGAGATAACTATAACAAATGGAACAAATACTTCCGATTTCAAAACATTAAATCAAGTCTATTTTTTTCGGTGTTTTTATGTCATATGCACTTTAAGATGTACAAACAATGACAGACAGTGAGTTGACAAATGGATCAGAAAAGCATGTTCCTCCACTTCTTGGTGTGCAGGGACATGCTTTGAGTTGGACTGACGATCTTCCTGTGTGTTATTTGTCAGGACTTGGCTTCTCAACCAATCAGATTTATAGAGAAGATGGCAACCGACTGGAGGAACATGAATTTGAAGACAAAAGTTTTCATTTCAGACCTTTTGATGGCTGTTTTCTCTATGGAGTGTTTGATGGTCACAAGGGAAATAAAGCATTTCTGGCTGTTGAGAAAGGCTATTTTGAATCTCTTGATGATTTGTTGGCCCAGAAAACTGACCTGCAGCTGTCTTTACCTGAGGGCATAAAACCTTATGAAGCTGCCAGGCAGTATCCCGACGTTGTTCAGAATCTGAAACGTATTGATGCACTGATGTCAGGTGGAACCACTGCCACAGTTGTTCTTATCTACAACAACCGACTGTTTGTCGCCAATGTAGGTGACACGCGGGTGCTGCTGTGCATCAGTGATCAGAACAACTTGCTCAGAGTTTTACAGCTCTCTGTTGATCACACTCTAGCCAATGAAACCGAGCAGGTGAGACTGGCAAACCTGGGCCTGGATGTTGAGAAACTGAAACAGCTGCGTAGAATAGGAAACTCTGAGAACACACGATGCATAGGTGACTACTCCGTCAAAGGTGGATATAAAGATATAGATAATTTAAGTGCTGCTAAGAGTGAACCAGTGATCGCTGTACCCAATATAACAGGAGGAATTCAACTCGACTCATCATGTTGTTTTCTTATCATCATGTCAGATGGTTTGTACCAGGCTCTGCAAGATGCCACTGGTACTGACAAAGTCAATGCTGACATTGTCGCCATGGTTGTGCAGGAGTTTGGCATTCAGACAACTCTGAATGGAGTTGCCCAGGCTGTTGTTGACAAAGTAGTAAGGATTCACCATGACACCTACATGACACAGCAGGGTCACAAGAAACAGCTGTGTCAGAAACGTGACGACATCACCCTCCTCGTGCGCAACTTCACTTACCCTCTGTCTAATCTAAGCAGCCCTACAGGTGGGGCTAGATACCCCTCCCCTGTTTCCATCCCTATTTATAACCCCAGACCGATAGTGCCTCCTCCGTTGTTAATGTCAACAGGACCTGTGAGTCCTCACTCTAACACAAACAGTTCTGTGAGCAGTTCCAGCGATGCCCCCGTTACCCCCACCAACAACCCCCCTGGACACTACCTGTCTCCAGAGAACACTAACACTAGGACAAGTAGTGGTACAGGAACAAGTACAAATTCGACAGAAAGCAGTGGTGAGTCTCGGCCGTTCCATCACAGTTACAGCGAGGCACCAAAGCTGGAGCTCGATGAAGATGGGAAGATTGAACCTTACGTGGACTTTTCTGATTTCTATAAAGCAATTGCTGAACTAACTCTTGCTCAGCAGGAATCGCTGAATGCTGACATGAAACCCAAGTCAGCGTACGATCCAGTCATTGAAGAGAATGAAACACAGGAAGAAAAATGATTGGATTTTAAAAATAATAATTATTTTTTTAAACTCTGAAATGAAAGACAAGATTAAATTTAATAATCTCCAATCATAGAGGAATTTTTTTTTTTTTAGTGCAATATTACAAATATCAGACTTTATTTAGTATTAATGCTGTGTTGGTTTTTTTTGTTGCTTATTTTGGGATAAACAAATACAAACATTAATAGATTCCACTTTTTTCTTCTTTGGTTTTTGAATTAGTGGTCACAATGAGTATATAGAAATATCTTCAGAAATATATATACCTGATTCTATTCTTTAACAGTTTTAGATTTCATTTGATAGTTCTTCAATAACAGGTATTAAAAATTTACAATGAAACAGTTTTAATATTTTGTTTACATCTAATAATGCAGCAAGTTAATTGTGTTTCATTGTCTTCTGCAAGATCAGAAGAAAGAAAACATTTGTTTATTTTATTGATAATAAAGGTGAAAGAATTTTTATATTGAATGAATATTGTTGATTTTTCTGATAGAGAAATTTGTTGATATCTTTGACATAATAACATCTGATTTGATAAAAGTATTTCCATATATACAGTGAACTTGCTTTTTTCCGGTTTGAAAATAATTTCAGATCAAGTTTTGTATCTATTGTATAAAATACTCGGATATCAGATTATGTAATAGTTTCTATGACTTATTTTCAATATCTGAATTAAATGTTTTTAAAAATC

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00481	PP2C	Protein phosphatase 2C	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001932	Domain	PPM-type phosphatase-like domain	Interproscan
IPR015655	Family	Protein phosphatase 2C	Interproscan
IPR036457	Homologous_superfamily	PPM-type phosphatase-like domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR13832	PROTEIN PHOSPHATASE 2C	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004722	Molecular Function	protein serine/threonine phosphatase activity	Interproscan
GO:0006470	Biological Process	protein dephosphorylation	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-

Expression pattern

1. Expression trend for CsqKR_Scaf10_10.38 global RNA-seq network