Gene detail

Detailed information of CsqKR_Scaf107_4.34 in Chrysomallon squamiferum Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
CsqKR_Scaf107_4.34	SERINE-THREONINE PROTEIN KINASE	chr14	15839773	15846046	-

Gene Structure

More details in Jbrowse Sequence

CDS

CsqKR_Scaf107_4.34

ATGTTACCTGCGAAGCCAGAGGATAATCTTGAATATGCCTGGTTTATGAGGAACCGCCTGGTCGCAGTAGAGACTTGGCAGGAAAAGTATGAAAAATACGAGCAGCCGCGAACAAACATAAACGACGAAGAACATAGTGCAGTTGACATTCCCTTTGAAGAGCTCGAGCTAACGAATAAAATAGGCTTAGGAGGGTTTGGATCAGTTTATTTTGCGATTTGGAAGGATCGGCCTGTTGGTGTTAAGATTCTGCACAAGTGTGACATGCGTGAGGAATTTCTCAAAGAGGTGAGACTGTCGTTGAAACTGAAGCACGAGAACATTGTCAGACGTCTTGGAATTAGTTTAGACACTTCCAAACTCTGCGTTGTTATGGAACTTATGGATTTGAGCTTATTTGATGCACTTCATTGCGAAGAGGATATAGTGTTTGATGACAGAGAGAAACTTGGGATAATTACACAAGTGTGTGCTGGACTGGCTTACATGCATAAGATCCGCGTGGCTCACTGCAACATAAAATCAAAAAACATCTTGCTGAATATACCTGAGATAAAGCAAGATGAAGAGCACCCTTACCTGAACATTACAGCGAAAATCACCGACTTCAGACGGAGTATGACGAAGGAAGCAAAAACCTCCGGATCTGTCGGGAAAGGAGGCACACACCAAGACTCGGCGAAGTATATGAAAAGAGATATTTATTCCTTTGGACTTGTTATGCTGGAAGTGTTTACCGAGGAAGTGACGATGCAAGAACAGGGAAAGGACAAACTGCTGAGCATTTCGAAAGCATTAATCAATCAAGATATCAAAGCAGAGATGAAGAAGTGCTTGGACTCTGATACGAAGAAAAGACCTACACCAGATGAAGTTTTGAAAGCAATTTCAAAAGTCAGGTTTTACAAAGACAATGATTTCAACCGAAAGCATCGCAGAGTAGGACTGCCGATCGGATCTAAACCGATTTCAAGAAAGTTAAAAAATCTGACAGATAAGGAAACAAAAGAGAAACGACGTCAGAAATTACCTGCGAAGCCAGAGGATAATCTTGAATATGCCTGGTTTATGAGGAACCGCCTGTTCGCAGTAGAGACTTGGCAGGAAAAGTATGAAAAATACGAGCAGCCGCGAACAAACATAAACGACGAAGAACATAGTGCAGTTTTGATTCCCTTTGAAGAGCTCGAGCTAACGAATGAAATAGGCTTAGGAGGGTTTGGATTTGTTTATTTTGCGATTTGGAAGGATCAGCCTGTTGGTGTTAAGATTCTGCACAAGTGTGACATGTGTGAGGAATTTCTCAAAGAGGTGAGACTGTCGTCGAAACTGAAGCACGAGAACATTGTCAGACGTCTTGGAATTAGTTTAGACACTTCCAAACTCTGCGTTGTAATGGAACTTACGGATTTGAGCTTATTTGATGCACTTCATTGCGAAGAGGATATAGTGTTTGATGACAGAGAGAAACTTGGGATAATTACACAAGTGTGTGCTGGACTGGCTTACATGCATGAGATCGGCGTGGCTCACTGCAACATAAAATCAAAAAACATCTTGCTGAATATACCTGAGATAAAGCAAGATGAAGAGCACCCTTACCTGAACATTACAGCGAAAATCACCGACTTCAGACGGAGTATGACGAAGGAAGCAAAAACCTCCGGATCTGTCGGGAAAGGAGGCACACACCAAGACTCGGCGAAGTATATGAAAAGAGATATTTATTCCTTTGGACTTGTTATGCTGGAAGTGTTTACCGAGGAAGTGACGATGCAAGAACAGGGAAAGGACAAACTGCTGAGCATTTCGAAAGCATTAATCAATCAAGATATCAAAGCAGAGATGAAGAAGTGCTTGGACTCTGATACGAAGAAAAGACCTACACCAGATGAAGTTTTGAAAGCAATTTCAAAAGTCAGGTTTTACAAAGACAATGATTTCAACCGAAAGCATCACAGATTACCTGCGAAGCCAGAGTATAATCTTGAATATGCCTGGTTTATGAGGAACCGCCTGATCGCAGTAGACGCTTGGCAGGAAAAGTATGAAAAATACGAGCAGCCGCGAACAAACATAAACGACGAAGAACATAGTGCAGTTTTGATTCCCTTTGAAGAGCTCGAGCTAACGAATAAAATAGGCTTAGGAGGGTTTGGATCAGTTTATTTTGCGATTTGGAAGGATCAGCCTGTTGGTGTTAAGATTCTGCACAAGTGTGACATGTGTGAGGAATTTCTCAAATTGGCGAGACTGTCGTCGAAACTGAAGCACGAGAACATTGTCAGACGTCTTGGAATTAGTTTAGACACTTCCAAACTCTGCGTTGTAACGGAACTTATGGATTTCAGCTTATTTGATGCACTTCATTGCGAAGAGCGAAAATCACCGACTTTGGGCAGACGAAACACAGAAACGGGATGTTTCCGAAACACAGGCACACCCCGATACTCAGCGCCCGAAGTTCTCCGTGGTGAGCGACTCAATCGTGAGCAGTATACAAAAGCCGATGTTTATTCCTTTGGACTTGTTATGCTGGAAGTGTTTACCGAGGAAGAACCCTTTTATAAACTCGACGAAATGCAGCTACGGAAGCAGATCGGCGAGAAGGAAATGATTCCGAACATTCCCAAAGATATCCGAATTGCTCGAGGTATCTACTCAGTGATGAATCGTTGCTGGGAACGTGATTCGAAGAGAAGACCTACAGCAGATGATATTCTGAAAACAATTTCATAA

Transcript

CsqKR_Scaf107_4.34

GTCCTCTAGTGACAATAGTTCAGAAACAGTCAAGGTTTATAAAGACAACGATTTCAACCGAAGGCACAACAGAGTAGGACTGTCGATCGGATCTAAACCGATTTCAAGAAAGTTAAAAAATCTGACAGATAAGGAAACAAAAGAGAAACGACGTCAGAAAGTTAAAGAAAACATTGAAAAGGAGAACCGACGTTTGATTCGTATGTTACCTGCGAAGCCAGAGGATAATCTTGAATATGCCTGGTTTATGAGGAACCGCCTGGTCGCAGTAGAGACTTGGCAGGAAAAGTATGAAAAATACGAGCAGCCGCGAACAAACATAAACGACGAAGAACATAGTGCAGTTGACATTCCCTTTGAAGAGCTCGAGCTAACGAATAAAATAGGCTTAGGAGGGTTTGGATCAGTTTATTTTGCGATTTGGAAGGATCGGCCTGTTGGTGTTAAGATTCTGCACAAGTGTGACATGCGTGAGGAATTTCTCAAAGAGGTGAGACTGTCGTTGAAACTGAAGCACGAGAACATTGTCAGACGTCTTGGAATTAGTTTAGACACTTCCAAACTCTGCGTTGTTATGGAACTTATGGATTTGAGCTTATTTGATGCACTTCATTGCGAAGAGGATATAGTGTTTGATGACAGAGAGAAACTTGGGATAATTACACAAGTGTGTGCTGGACTGGCTTACATGCATAAGATCCGCGTGGCTCACTGCAACATAAAATCAAAAAACATCTTGCTGAATATACCTGAGATAAAGCAAGATGAAGAGCACCCTTACCTGAACATTACAGCGAAAATCACCGACTTCAGACGGAGTATGACGAAGGAAGCAAAAACCTCCGGATCTGTCGGGAAAGGAGGCACACACCAAGACTCGGCGAAGTATATGAAAAGAGATATTTATTCCTTTGGACTTGTTATGCTGGAAGTGTTTACCGAGGAAGTGACGATGCAAGAACAGGGAAAGGACAAACTGCTGAGCATTTCGAAAGCATTAATCAATCAAGATATCAAAGCAGAGATGAAGAAGTGCTTGGACTCTGATACGAAGAAAAGACCTACACCAGATGAAGTTTTGAAAGCAATTTCAAAAGTCAGGTTTTACAAAGACAATGATTTCAACCGAAAGCATCGCAGAGTAGGACTGCCGATCGGATCTAAACCGATTTCAAGAAAGTTAAAAAATCTGACAGATAAGGAAACAAAAGAGAAACGACGTCAGAAATTACCTGCGAAGCCAGAGGATAATCTTGAATATGCCTGGTTTATGAGGAACCGCCTGTTCGCAGTAGAGACTTGGCAGGAAAAGTATGAAAAATACGAGCAGCCGCGAACAAACATAAACGACGAAGAACATAGTGCAGTTTTGATTCCCTTTGAAGAGCTCGAGCTAACGAATGAAATAGGCTTAGGAGGGTTTGGATTTGTTTATTTTGCGATTTGGAAGGATCAGCCTGTTGGTGTTAAGATTCTGCACAAGTGTGACATGTGTGAGGAATTTCTCAAAGAGGTGAGACTGTCGTCGAAACTGAAGCACGAGAACATTGTCAGACGTCTTGGAATTAGTTTAGACACTTCCAAACTCTGCGTTGTAATGGAACTTACGGATTTGAGCTTATTTGATGCACTTCATTGCGAAGAGGATATAGTGTTTGATGACAGAGAGAAACTTGGGATAATTACACAAGTGTGTGCTGGACTGGCTTACATGCATGAGATCGGCGTGGCTCACTGCAACATAAAATCAAAAAACATCTTGCTGAATATACCTGAGATAAAGCAAGATGAAGAGCACCCTTACCTGAACATTACAGCGAAAATCACCGACTTCAGACGGAGTATGACGAAGGAAGCAAAAACCTCCGGATCTGTCGGGAAAGGAGGCACACACCAAGACTCGGCGAAGTATATGAAAAGAGATATTTATTCCTTTGGACTTGTTATGCTGGAAGTGTTTACCGAGGAAGTGACGATGCAAGAACAGGGAAAGGACAAACTGCTGAGCATTTCGAAAGCATTAATCAATCAAGATATCAAAGCAGAGATGAAGAAGTGCTTGGACTCTGATACGAAGAAAAGACCTACACCAGATGAAGTTTTGAAAGCAATTTCAAAAGTCAGGTTTTACAAAGACAATGATTTCAACCGAAAGCATCACAGATTACCTGCGAAGCCAGAGTATAATCTTGAATATGCCTGGTTTATGAGGAACCGCCTGATCGCAGTAGACGCTTGGCAGGAAAAGTATGAAAAATACGAGCAGCCGCGAACAAACATAAACGACGAAGAACATAGTGCAGTTTTGATTCCCTTTGAAGAGCTCGAGCTAACGAATAAAATAGGCTTAGGAGGGTTTGGATCAGTTTATTTTGCGATTTGGAAGGATCAGCCTGTTGGTGTTAAGATTCTGCACAAGTGTGACATGTGTGAGGAATTTCTCAAATTGGCGAGACTGTCGTCGAAACTGAAGCACGAGAACATTGTCAGACGTCTTGGAATTAGTTTAGACACTTCCAAACTCTGCGTTGTAACGGAACTTATGGATTTCAGCTTATTTGATGCACTTCATTGCGAAGAGCGAAAATCACCGACTTTGGGCAGACGAAACACAGAAACGGGATGTTTCCGAAACACAGGCACACCCCGATACTCAGCGCCCGAAGTTCTCCGTGGTGAGCGACTCAATCGTGAGCAGTATACAAAAGCCGATGTTTATTCCTTTGGACTTGTTATGCTGGAAGTGTTTACCGAGGAAGAACCCTTTTATAAACTCGACGAAATGCAGCTACGGAAGCAGATCGGCGAGAAGGAAATGATTCCGAACATTCCCAAAGATATCCGAATTGCTCGAGGTATCTACTCAGTGATGAATCGTTGCTGGGAACGTGATTCGAAGAGAAGACCTACAGCAGATGATATTCTGAAAACAATTTCATAA

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00069	Pkinase	Protein kinase domain	Domain	Interproscan
PF07714	PK_Tyr_Ser-Thr	Protein tyrosine and serine/threonine kinase	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000719	Domain	Protein kinase domain	Interproscan
IPR001245	Domain	Serine-threonine/tyrosine-protein kinase, catalytic domain	Interproscan
IPR011009	Homologous_superfamily	Protein kinase-like domain superfamily	Interproscan
IPR050167	Family	Serine/threonine-protein kinase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR23257	SERINE-THREONINE PROTEIN KINASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004672	Molecular Function	protein kinase activity	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0005737	Cellular Component	cytoplasm	Interproscan
GO:0006468	Biological Process	protein phosphorylation	Interproscan
GO:0007165	Biological Process	signal transduction	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-

Expression pattern

1. Expression trend for CsqKR_Scaf107_4.34 global RNA-seq network