Gene detail

Detailed information of CsqKR_Scaf106_9.33 in Chrysomallon squamiferum Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
CsqKR_Scaf106_9.33	IGGFC_BINDING DOMAIN-CONTAINING PROTEIN	chr13	19966928	19974486	-

Gene Structure

More details in Jbrowse Sequence

CDS

Transcript

CsqKR_Scaf106_9.33

ACGGTACAACTATGTAGGAGTGTTTTCTCATAACCCAGCCGCAACAAAATCTATGAAACCTCACATTTACATCTCCGCGGAGAATTCTGTCAACGTTACGATAACAATTCCTTTCCTTTCTTCTTCGCCCTACATGGAATTTAGTCTCAGAGCCTCCAAGATAAAAAGAATTGCTCTGCCAACGGAAATACGAATGCCACCGACCTCTTCAGTTTCGCAGAAGTCCATACTAGTTCAAGCAGATAAGCCAGTATCGGTAATACTCGCCAACAGACAGACGTCCAACATTGACGCTGTCAGTCTGTTGGAGGTAGGAATGCTGGGATCGAGTTACGTAGCGTTTTCATATCTTGGTAAACGAAAGGGTTCGTTTATCGTCGTCGCTGTTCCTTTCAACAATACCAGAGTGACTGTCGAAACCCCATCACCAATGAAGCCTGTAAACGTCGAAGTTAGAAGTGAAACGTTCACCATGTCCTCTCGTCTGACCTTGACCTTGCAAACTTTAGACTCTCTTCAGATACTGAGAAAAGACGATGTTGACCTCACTGGAACGAAGATTTCGTCCGACAAAAAGATCGCAGTGTTTTCTGGTCACGTGCGTACTTCAATTAACAACCCATCATCCGCTGATCATTTGGTGGATCAGATGCCCCCGACAAAGAATCTCATGACGGAATACGTTCTCTTCACTCCCTACAGTGGCAGTTACGTCGACCTGCTACGACTTGTTGCAGTCTACAACGACACCAACATCACTGTGGACGGAAGTATTACGTTGACAATCCCGGAAGAGTACGGCCACGTTGATACGTTTATTAAACGAAAGAAAGTCCACCATGTCCAGTCGTCAAGACCTCTGTTAGCGGGAGTAATTCCAAAGACGAGTGGTGAGTCAGATGCGGCGTTGTGCATACTTGACTCGGTTCCATTTACTGCTAAGAAATACGTCTTTTCCGTCCCAGATTTGGCATTCAAAAAAACCAAGGTCGTTATCATCATAAAGAGTGGACAGCAGTTTGAAATAACTCTGAATGGAAAGTCACTGACAGAAGGAACAACGTGGTACACGTCTTCTTCGACCGATTATGTAGTAGCTTCGGTTGCAGTTGTAAAATACGTCGTTTACGTCCTGAAGCATCCGAGATCTCGGTTCGGCGCCTACTTGATAGGATCTGGTTCTTCTAGAAGTTACTCGTACAGATTAACACCGGAATATCAGTGTAGCAGTGAGAGTCGTTTCAAAAGACACCCAAACAGAAAAGTCACGTGTCATCACTCAGAGCACGTGCAGGTCGGCAAGGAGTTTGAGTGTTACGACGCATGAGTGTTTTCTCATAACCGAGTAAATAAAGATCCTATGGATCCCTTTATTCAGATCTCCGCGGAGAATCGGGTCAACGTTACGATAACAATTCCTTTCCTTTCTTCTTCGCCCTACATGGAATTTAGTCTCAGAGCCTCGCAAACAAAAAATATCGTTCTTCCAGCGGAAGTACGAATGCCACCGACCTGTTCAGTTTCTCAGAGGTCCATACTAGTTGAAGCAGATAAGCCAGTATCGGTAATACTCGTTAACAAGCAGAAATCCAGCAGTGACGCTGTCAGTTTGTTGGAGCTAGGAATGCTGGGATCGAGTTACGTAGTGTTGTCGTATGTTGGTAGACGAAAAGGTTCGTTTATTGTCATCGCTGTTCCTTTCAACAACACCAGAGTGACTGTGGAAACCCCGAAAGAAGTCACGCCATTCAGCATAGAAGTTAGAAACCAAACGTTCAACGTGTCCTCTGAACTGACCTTGACCTTGGATACTTTAGACTCTCTTCAGATACTGAGAGAAGACCATGTTGACCTTACAGGAACGAAGATTTCGTCCGACAAAACGATCGCAGTGTTTTCTGGTCACGTGCGTACTTCAATTAACAGCATTTACGCTGATCATTTAGTGGATCAGATGCCTCCGACAAAGAATCTCATGACGGAATATGTTCTCTACACTCCCTACAGTGGCAGTGACTTCGACCTGCTACGACTTGTTGCAGTCTACAACGACACCAACGTCACTGTGGACGGAAGGATTACGTTGACAATCCCCGAAGAGTACGGCCACGTTGATACGTTTATTAAACGAAAGAAAGTCCACCATGTCCAGTCGTCAAGACCTCTGTTAGCTGGAGTAATTCCAAAGACAGGTAATTACACAGATGCGGCGTTGTGCATACTTGACTCTGTTCCATTTACTGGTAACAAATACGTCTTTTCCGTCCCACATTTGGCTTTCGAGAAAACCAGGGTCGTTGTCATCATAAAGAGTGGACAGCAGTTTGAATTAACTCTGAATGGAAAGTCGCTGGCAGAAGCAACAATGTGGTACACGTCTTCTTCGACCGATTATGTAGCAGCTTCAGTTGCAGTTGTAAAATACGTCGTTTACGTCCTGAAGCATCCGAGATCTCGGTTCGGCGCCTACTTGATAGGATCTGGTTATTATGAAAGTTTCTCGTACAGATTAACACCGGAATATCA

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF17517	IgGFc_binding	IgGFc binding protein	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR035234	Domain	IgGFc-binding protein, N-terminal	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46534	IGGFC_BINDING DOMAIN-CONTAINING PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
-	-	-	-

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-

Expression pattern

1. Expression trend for CsqKR_Scaf106_9.33 global RNA-seq network