Gene detail

Detailed information of CsqKR_Scaf103_47.47 in Chrysomallon squamiferum Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
CsqKR_Scaf103_47.47	-	chr6	33807688	33812984	-

Gene Structure

More details in Jbrowse Sequence

CDS

Transcript

CsqKR_Scaf103_47.47

ATGACTCGATACGAATTCGAAAAGCATCTCTCCAATGCCAAAAGCGAGGAGGAATTAAAGAGACATCTTGATTTAAAGCATTCAGACTACAAAGTTCTGTTAGAACGACACAGAAATCACTTCCAGGCTTTAGAAATCATCAAGAAAAATCTTGAGGCCTCAAATATAGAGACGAGAGTTGTAAGTCGATTTGATTTCAACAGTGATGTTATTAATTGGGCTGATGTAATTTTCACTGCTGGTGGGGACGGAACATTTCTGCTAGCTGCAAGCAAAATCTTGGATAAAAGCAAACCTGTTATAGGACTAAACACTGACCCTGACAGATCAGAAGGATGTTTGTTACTACCTAAAAAAGAATATGCAGCACTCAACTTTGAGGCAGCACTAAGGAGACTGTTACAAGGTGATTTCAGCTGGAAGTGGCGTAACAGAATACGAATTACAATGTCTGGTTTCCATGCTGATGATGATCCCATAGAACTGCATGACCAACAGCTGGAATGCATGGAGCATCGCTTTACTGAGCATATTCATGAATACGAAATGCATGAAGTGAGGCAGCATGGACATCTATCAGAAGAACAAGTTTCTTACTATGAATTTGCTGTAGATGACTCACCAGGAGAAAAGCAGAAAAGTTCTGGAATTACCATCTGCACTGGAACGGGTTCCAGTTCATGGTATTTTAATATCAACCAAATTCATATTGAAGCAGTTAAAGACATTCTTAGTACAGCTAACAAACATGCAGGAACAAGTTTTCCAACATGTGACAAAGATCTACTTCAAAGAATAGCCAGAGACTTCAACAGCTCTCTTTGTTTTGATGCATCAGAACTTAGGATGGCTTTTACTATCAGAGATCCAGTTGTAAACGGAGTTTTTCAAGTTACAAAGCCACGAGGATTTGCAAACAGGTTGTCAATTTTGTCTCGAATGTGGGATGCCTGTTTAGTTGTAGATGGTGGATCTTCTTTTAAATTTAATGATGGTGCAATAGCAACACTGGAAATACATGATGACGATGCCTTGAGAACCGTTTCGTTTGACTAAAATTTTGTCAAGATGGATGCAGTTGTGAACATAGGTGTGAAAATTACGCAAGTGACGTTGATTTTGGTCACGTACTATAATAGTCAGTCAAATAATGTACATCCCTGTGAGTGTGTGGTGTGAAAACAGATGTTGACTCATTAATAACTACTTCATATATAACAAGTTATTTTAATATTTTGGTTAATTTTAACTTTCTAGAGCATCATATTAACAATGTGCTTTATTAATACAGTTGCAGTTAAATACTTAACAATTATCTAACAACTAATCATGGACTTTAAAGACAGCTGCAGATAAATTTTAGGCATGGTAAAACATTCCATCAGATGTTTCTTTACATTTCTTTTTGGAAAACAGCTTTAACTGGCTCATCTCACCAAATAATTATTTTGCTACTTCAAAGGAAACATTACACAAGTTGTTGTTGTGAAAACAAAGCAAATCATTGTTAAAATGTTAAGATAATTTTATTTTGAAATGTTGTTTGTTGCATGACCCATGACAAATACCTCTGAATTCTCATTTTACAAAACTTTTTAGTGAAATATTGGTGTGGATTTTAATTTCAGATTGCAGTAAACATTTTTTTTTTCTTAAATATTTGTCCTCCCATGTTTAATAAACATTTTGTTATATGAAAATAATTGTGATTGATCAAATCTGTGAATTTGTTTGTGTGTGTGAATCCCAAATGCTATTTATAATGACTTTGATGAATCTCTACAATATTGAGGATTGTAATATAAAATCAGTTTTAATATATATTGTTTTTCTGTTGTATTTTCTTAGATTTTAGGCACTGCATATTTGCTTAATTTAGCTGCTTGAAATTCATTTCCACTCAGATTTTTATAATAATAAAAGTAAAACCGTAACAGTGTTACAGTAAGCCAAATGTTTTATGTGCTGGCTTCTTTTCAGTTAAAGTCTAATTATTTTGTTTATATTGTTTTACCATTAAAACTACTAAATGTG

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01513	NAD_kinase	ATP-NAD kinase N-terminal domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR002504	Family	NAD kinase	Interproscan
IPR016064	Homologous_superfamily	NAD kinase/diacylglycerol kinase-like domain superfamily	Interproscan
IPR017437	Homologous_superfamily	ATP-NAD kinase, PpnK-type, C-terminal	Interproscan
IPR017438	Homologous_superfamily	Inorganic polyphosphate/ATP-NAD kinase, N-terminal	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR13158	-	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003951	Molecular Function	NAD+ kinase activity	Interproscan
GO:0005739	Cellular Component	mitochondrion	Interproscan
GO:0006741	Biological Process	NADP biosynthetic process	Interproscan
GO:0019674	Biological Process	NAD metabolic process	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-

Expression pattern

1. Expression trend for CsqKR_Scaf103_47.47 global RNA-seq network