Detailed information of CsqKR_Scaf102_6.18 in Chrysomallon squamiferum Gene info
Gene IDAnnotationChromosomeStartEndStrand
CsqKR_Scaf102_6.18GENERAL TRANSCRIPTION FACTOR IIF SUBUNIT 2chr21338218913386642+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02270TFIIF_betaTFIIF, beta subunit HTH domainDomainInterproscan
PF17683TFIIF_beta_NTFIIF, beta subunit N-terminusFamilyInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR003196FamilyTranscription initiation factor IIF, beta subunitInterproscan
IPR011039Homologous_superfamilyTranscription Factor IIF, Rap30/Rap74, interactionInterproscan
IPR036388Homologous_superfamilyWinged helix-like DNA-binding domain superfamilyInterproscan
IPR036390Homologous_superfamilyWinged helix DNA-binding domain superfamilyInterproscan
IPR040450DomainTFIIF beta subunit, HTH domainInterproscan
IPR040504DomainTFIIF, beta subunit, N-terminalInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR10445GENERAL TRANSCRIPTION FACTOR IIF SUBUNIT 2Interproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0005674Cellular Componenttranscription factor TFIIF complexInterproscan
GO:0006366Biological Processtranscription by RNA polymerase IIInterproscan
GO:0006367Biological Processtranscription initiation at RNA polymerase II promoterInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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Expression pattern
 1. Expression trend for CsqKR_Scaf102_6.18 global RNA-seq network
TOP