| Gene ID | Annotation | Chromosome | Start | End | Strand |
|---|---|---|---|---|---|
| CsqKR_Scaf102_12.22 | TETRATRICOPEPTIDE REPEAT PROTEIN 14 | chr2 | 13943636 | 13955182 | + |
| CDS | |||||
| CsqKR_Scaf102_12.22 | |||||
| Transcript |
| CsqKR_Scaf102_12.22 |
| Protein |
| CsqKR_Scaf102_12.22 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00575 | S1 | S1 RNA binding domain | Domain | Interproscan |
| PF13181 | TPR_8 | Tetratricopeptide repeat | Repeat | Interproscan |
| PF13414 | TPR_11 | TPR repeat | Repeat | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR003029 | Domain | S1 domain | Interproscan |
| IPR011990 | Homologous_superfamily | Tetratricopeptide-like helical domain superfamily | Interproscan |
| IPR012340 | Homologous_superfamily | Nucleic acid-binding, OB-fold | Interproscan |
| IPR019734 | Repeat | Tetratricopeptide repeat | Interproscan |
| IPR039190 | Family | Tetratricopeptide repeat protein 14 | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR23184 | TETRATRICOPEPTIDE REPEAT PROTEIN 14 | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0003676 | Molecular Function | nucleic acid binding | Interproscan |
| GO:0005515 | Molecular Function | protein binding | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
| 1. Expression trend for CsqKR_Scaf102_12.22 global RNA-seq network |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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