| Gene ID | Annotation | Chromosome | Start | End | Strand |
|---|---|---|---|---|---|
| CsqKR_Scaf101_2.30 | RING FINGER DOMAIN-CONTAINING, POLYCOMB GROUP COMPONENT | chr8 | 8374000 | 8379355 | - |
| CDS | |||||
| CsqKR_Scaf101_2.30 | |||||
| Transcript |
| CsqKR_Scaf101_2.30 |
| Protein |
| CsqKR_Scaf101_2.30 |
| Gene family | Subfamily |
|---|---|
| Ubiquitin Family | ULD|UFD|RAWUL |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF13923 | zf-C3HC4_2 | Zinc finger, C3HC4 type (RING finger) | Domain | Interproscan |
| PF16207 | RAWUL | RAWUL domain RING finger- and WD40-associated ubiquitin-like | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR001841 | Domain | Zinc finger, RING-type | Interproscan |
| IPR013083 | Homologous_superfamily | Zinc finger, RING/FYVE/PHD-type | Interproscan |
| IPR017907 | Conserved_site | Zinc finger, RING-type, conserved site | Interproscan |
| IPR032443 | Domain | RAWUL domain | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR10825 | RING FINGER DOMAIN-CONTAINING, POLYCOMB GROUP COMPONENT | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0000122 | Biological Process | negative regulation of transcription by RNA polymerase II | Interproscan |
| GO:0035102 | Cellular Component | PRC1 complex | Interproscan |
| GO:1990841 | Molecular Function | promoter-specific chromatin binding | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
| 1. Expression trend for CsqKR_Scaf101_2.30 global RNA-seq network |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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