| Gene ID | Annotation | Chromosome | Start | End | Strand |
|---|---|---|---|---|---|
| Csp24G004780.1 | UBIQUITIN CONJUGATING ENZYME 7 INTERACTING PROTEIN-RELATED | Chr24 | 11345846 | 11355905 | + |
| CDS | |||||
| Csp24G004780.1 | |||||
| Transcript |
| Csp24G004780.1 |
| Protein |
| Csp24G004780.1 |
| Gene family | Subfamily |
|---|---|
| Ubiquitin Family | UBD|ZnF|NZF |
| Ubiquitin Family | ULD|UFD/UBQ|UBQ_Other |
| Ubiquitin Family | E3|E3 activity|RBR |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00641 | zf-RanBP | Zn-finger in Ran binding protein and others | Domain | Interproscan |
| PF16764 | Sharpin_PH | Sharpin PH domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR001841 | Domain | Zinc finger, RING-type | Interproscan |
| IPR001876 | Domain | Zinc finger, RanBP2-type | Interproscan |
| IPR011993 | Homologous_superfamily | PH-like domain superfamily | Interproscan |
| IPR013083 | Homologous_superfamily | Zinc finger, RING/FYVE/PHD-type | Interproscan |
| IPR017907 | Conserved_site | Zinc finger, RING-type, conserved site | Interproscan |
| IPR029071 | Homologous_superfamily | Ubiquitin-like domain superfamily | Interproscan |
| IPR031912 | Domain | Sharpin, PH domain | Interproscan |
| IPR036443 | Homologous_superfamily | Zinc finger, RanBP2-type superfamily | Interproscan |
| IPR044066 | Domain | TRIAD supradomain | Interproscan |
| IPR047557 | Domain | Heme-oxidized IRP2 ubiquitin ligase 1, Rcat domain | Interproscan |
| IPR047558 | Domain | Heme-oxidized IRP2 ubiquitin ligase 1, BRcat domain | Interproscan |
| IPR047559 | Domain | Heme-oxidized IRP2 ubiquitin ligase 1, modified RING finger, HC subclass | Interproscan |
| IPR051628 | Family | Linear Ubiquitination-Associated E3 Ligases | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR22770 | UBIQUITIN CONJUGATING ENZYME 7 INTERACTING PROTEIN-RELATED | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0000151 | Cellular Component | ubiquitin ligase complex | Interproscan |
| GO:0004842 | Molecular Function | ubiquitin-protein transferase activity | Interproscan |
| GO:0043123 | Biological Process | positive regulation of canonical NF-kappaB signal transduction | Interproscan |
| GO:0043130 | Molecular Function | ubiquitin binding | Interproscan |
| GO:0043161 | Biological Process | proteasome-mediated ubiquitin-dependent protein catabolic process | Interproscan |
| GO:0097039 | Biological Process | protein linear polyubiquitination | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
© 2024 All Rights Reserved.
