Gene ID | Annotation | Chromosome | Start | End | Strand |
---|---|---|---|---|---|
Csp24G003230.1 | RNA PROCESSING PROTEIN LD23810P | Chr24 | 7596367 | 7605394 | - |
CDS | |||||
Csp24G003230.1 | |||||
Transcript |
Csp24G003230.1 |
Protein |
Csp24G003230.1 |
Gene family | Subfamily |
---|---|
- | - |
Pfam accession | Pfam name | Description | Type | Source |
---|---|---|---|---|
PF00076 | RRM_1 | RNA recognition motif | Domain | Interproscan |
PF01805 | Surp | Surp module | Family | Interproscan |
PF04818 | CID | CID domain | Repeat | Interproscan |
PF08312 | cwf21 | cwf21 domain | Domain | Interproscan |
InterPro term | Type | Description | Source |
---|---|---|---|
IPR000061 | Domain | SWAP/Surp | Interproscan |
IPR000504 | Domain | RNA recognition motif domain | Interproscan |
IPR006569 | Domain | CID domain | Interproscan |
IPR008942 | Homologous_superfamily | ENTH/VHS | Interproscan |
IPR012677 | Homologous_superfamily | Nucleotide-binding alpha-beta plait domain superfamily | Interproscan |
IPR013170 | Domain | mRNA splicing factor Cwf21 domain | Interproscan |
IPR035009 | Domain | SR140, RNA recognition motif | Interproscan |
IPR035967 | Homologous_superfamily | SWAP/Surp superfamily | Interproscan |
IPR035979 | Homologous_superfamily | RNA-binding domain superfamily | Interproscan |
IPR047488 | Domain | U2-associated protein SR140, cwf21 domain | Interproscan |
IPR051485 | Family | SR-related and CTD-associated factor | Interproscan |
PANTHER term | Description | Source |
---|---|---|
PTHR23140 | RNA PROCESSING PROTEIN LD23810P | Interproscan |
GO terms | Category | Description | Source |
---|---|---|---|
GO:0003676 | Molecular Function | nucleic acid binding | Interproscan |
GO:0003723 | Molecular Function | RNA binding | Interproscan |
GO:0005634 | Cellular Component | nucleus | Interproscan |
GO:0006396 | Biological Process | RNA processing | Interproscan |
KO | Enzyme | Enzyme ID | pathway | mapID | Source |
---|---|---|---|---|---|
- | - | - | - | - | - |