| Gene ID | Annotation | Chromosome | Start | End | Strand |
|---|---|---|---|---|---|
| Csp24G000750.1 | NACHT, LRR AND CARD DOMAINS-CONTAINING | Chr24 | 1572565 | 1578352 | + |
| CDS | |||||
| Csp24G000750.1 | |||||
| Transcript |
| Csp24G000750.1 |
| Protein |
| Csp24G000750.1 |
| Gene family | Subfamily |
|---|---|
| Ubiquitin Family | E3|E3 activity RING|RING |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00097 | zf-C3HC4 | Zinc finger, C3HC4 type (RING finger) | Domain | Interproscan |
| PF05729 | NACHT | NACHT domain | Domain | Interproscan |
| PF13516 | LRR_6 | Leucine Rich repeat | Repeat | Interproscan |
| PF14484 | FISNA | Fish-specific NACHT associated domain | Family | Interproscan |
| PF17776 | NLRC4_HD2 | NLRC4 helical domain HD2 | Domain | Interproscan |
| PF17779 | NOD2_WH | NOD2 winged helix domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR001611 | Repeat | Leucine-rich repeat | Interproscan |
| IPR001841 | Domain | Zinc finger, RING-type | Interproscan |
| IPR007111 | Domain | NACHT nucleoside triphosphatase | Interproscan |
| IPR013083 | Homologous_superfamily | Zinc finger, RING/FYVE/PHD-type | Interproscan |
| IPR017907 | Conserved_site | Zinc finger, RING-type, conserved site | Interproscan |
| IPR018957 | Domain | Zinc finger, C3HC4 RING-type | Interproscan |
| IPR027417 | Homologous_superfamily | P-loop containing nucleoside triphosphate hydrolase | Interproscan |
| IPR029495 | Domain | NACHT-associated domain | Interproscan |
| IPR032675 | Homologous_superfamily | Leucine-rich repeat domain superfamily | Interproscan |
| IPR041075 | Domain | NOD2, winged helix domain | Interproscan |
| IPR041267 | Domain | NACHT, LRR and PYD domains-containing protein, helical domain HD2 | Interproscan |
| IPR051261 | Family | NOD-like receptor (NLR) | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR24106 | NACHT, LRR AND CARD DOMAINS-CONTAINING | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0005515 | Molecular Function | protein binding | Interproscan |
| GO:0035556 | Biological Process | intracellular signal transduction | Interproscan |
| GO:0046872 | Molecular Function | metal ion binding | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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