| Gene ID | Annotation | Chromosome | Start | End | Strand |
|---|---|---|---|---|---|
| Csp23G004500.1 | RHO-TYPE GUANINE NUCLEOTIDE EXCHANGE FACTOR, ISOFORM F | Chr23 | 10220790 | 10234499 | - |
| CDS | |||||
| Csp23G004500.1 | |||||
| Transcript |
| Csp23G004500.1 |
| Protein |
| Csp23G004500.1 |
| Gene family | Subfamily |
|---|---|
| Ubiquitin Family | UBD|Other|SH3 |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00018 | SH3_1 | SH3 domain | Domain | Interproscan |
| PF00169 | PH | PH domain | Domain | Interproscan |
| PF00307 | CH | Calponin homology (CH) domain | Domain | Interproscan |
| PF00621 | RhoGEF | RhoGEF domain | Domain | Interproscan |
| PF16523 | betaPIX_CC | betaPIX coiled coil | Coiled-coil | Interproscan |
| PF16614 | RhoGEF67_u2 | Unstructured region two on RhoGEF 6 and 7 | Disordered | Interproscan |
| PF16615 | RhoGEF67_u1 | Unstructured region one on RhoGEF 6 and 7 | Disordered | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR000219 | Domain | Dbl homology (DH) domain | Interproscan |
| IPR001452 | Domain | SH3 domain | Interproscan |
| IPR001715 | Domain | Calponin homology domain | Interproscan |
| IPR001849 | Domain | Pleckstrin homology domain | Interproscan |
| IPR011993 | Homologous_superfamily | PH-like domain superfamily | Interproscan |
| IPR032409 | Domain | Rho guanine nucleotide exchange factor 6/7, coiled-coil domain | Interproscan |
| IPR035899 | Homologous_superfamily | Dbl homology (DH) domain superfamily | Interproscan |
| IPR036028 | Homologous_superfamily | SH3-like domain superfamily | Interproscan |
| IPR036872 | Homologous_superfamily | CH domain superfamily | Interproscan |
| IPR046376 | Domain | RhoGEF 6/7, PH domain | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR46026 | RHO-TYPE GUANINE NUCLEOTIDE EXCHANGE FACTOR, ISOFORM F | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0005085 | Molecular Function | guanyl-nucleotide exchange factor activity | Interproscan |
| GO:0005515 | Molecular Function | protein binding | Interproscan |
| GO:0005737 | Cellular Component | cytoplasm | Interproscan |
| GO:0030027 | Cellular Component | lamellipodium | Interproscan |
| GO:0030032 | Biological Process | lamellipodium assembly | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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