Gene detail

Detailed information of Csp23G000780.1 in Chaunax sp. Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
Csp23G000780.1	CYCLIN Y, ISOFORM A	Chr23	2629070	2632721	-

Gene Structure

More details in Jbrowse Sequence

CDS

Transcript

Csp23G000780.1

AGACACTAAAACGAgggcttttactttgaaaagcaGTAGGCGGAAGTTACCTTTGAACTCAATGTTTAGACTGATTTGACGTCCAAGACGTATCCTGCTAACGCTGACTGTCTTTGTAGAATTCCAGGTTTTGCTAGGTTCTGCTTCTTTAGCTGTCTCAggagtttgttttttctcagttcGTATCTTAGTCTCTTTAACCGGAGAGAGACTTCTTGTGCCGTGAAAATGGATCGACCCATGCAGCCAGGAACGGATTGAGGTGCGGAAGCTAGCGTTAGCCGGCTAGCCATGGAGGGAGACATAGGAGCTTATGACTTTGTATTGTTAGCTTCTGTTCCGTAAAATGAGTTGATATTAGTAGATACTCATCGTCCAAAACTATTCAGTCCACGCATTTGATTCTTGCTAAAGTACGCCAGTGCTATGTTGCGCACACGCCCTGAGTATGTCAGCTGTCCTGCACATACCGCAGTTGGTTGACTCTGAATCCGGATATTTCACCTTGTAGCCCAACACACCGGCTAGACTGGTCCTAACATGCGAAACCAGGTCATTTCAAAGATTTAAATGCAGGGTTTTACCTCTGACATCAACAGTGTCGTATTTACTTTGGCGTCACCTGTAATTAAAGTTGCACACACGGTAGATTAGCAGGTGATccgtcgtcctcctcctcctcatcggTTGTATGGGAACGGGCGCTGGCCGTAGCAGGAGAGCTGTAGGTCAACAATGGGAGGCTCTGTGTCTTGCTGTATCTCTCCTGGAGAGAGTCCCAAGATCCACAGGAGAGATGTGGAGCTGGAGGAGTGTCCCATCACCACCACTGAGGACGTGAGTGAAGACACTGGTACCTACCTGCAGCACATCAGTGACAGGGAGCTCCCTGATGAACTGGCCCATGAGGCCAATCCATCAGACCACCCGAGAGCCAGCACCCTCTTCCTCAACAAGTCGCAGACGGATGTGCGTGAGAAAAGGAAAAGCAATTACATGAATCACCAGATGTCTCCGGGGCCTCTGACAAAAAAGTTTAGTTCCTGCTCGACGATATTCATCGATGACAGCACGGTCAGCCAGCCCAACCTCAAGAGCACAATCAAATGCGTTGCACTGGCCATATACTACCACATAAAAAACAGAGACTCAAACCGCTCGCTGGATATATTTGACGAGAGGAAGCACCCTCTGTCGCGAGAGAAAGTTCCAGATGACTACTCTGTGGTCGACCCAGAACACAAACTCATTTACCGCTTCATACGGACGCTGTTCAGCTCTGCGCAGCTCACTGCTGAGTGCGCCATCGTCACTCTGGTATACCTGGAAAGGCTGTTGACATACGCTGAGATGGACATATGCCCTTGTAACTGGAAGCGGATTGTCCTCGGTGCCATCCTGTTGGCCTCTAAGGTCTGGGACGACCAGGCCGTGTGGAACGTGGACTACTGCCAGATCCTCAAAGACATCACAGTGGAGGACATGAATGAGATGGAGCGTCACTTCCTGGAGCTACTCCAGTTTAACATTAACGTCCCAGCCAGTGTCTACGCCAAGTATTATTTTGATTTGCGCTCACTGGCGGACGACAACAACCTCAGTTTCCCTTTGGAGCCACTCAGCAATAAGCGGGCCCAGAAACTCGAGGCCATCTCCAGGCTGTGCGAGGACAAGTACAAGGACCTAAGTAAAGCTGCTATGAGGCGGTCTATCAGTGCAGACAACCTAGTTGGTATCAAGAACTCCAAGGCTGTGCTGTCTTGAGTCTGCGACAGCCATCTTGGATCCGGCGAGGAGGTGGAGCAAGTCAAACAGCATTCACCAAGAGACATTTCCAAAGTAGGGTCACGTCAGTAACTGAAAAGCTCCATTATGAAATATTACATGTCTGTTTTGGAAAGGAACAAAGACCAGAGGATGACCATACAGTAGCTCTAAAATATAATGAAACCAGTCTCTATATCTTCATTGCAAAGACCTTCAGCTATCTGCTTTTAAAGCATAATGATATGGTGGAATATATTGCAGAttgtcacattttctttcaAGCGGTGGAACTTTGGAGGGAATCCGGATGAAAATGCTTCCTAAAATCACTTAAACTGAGGCCCTCATCTTCCTTCTTCTTTACATCAGTCGATCCTTTGGGGAGTAATTCCTTCAGCTTCTTCCCCCCTCTCTCCACCAGGCGTCTCCTGACTCCTTTATCCACATGATGACAGCCTGTATTGAACTACCCTGTGGTGTAGTTCTGCACATGGACAAAGAGTAGACTTTGTTTTGCTTACTGTGTAGGCCCCTATAGCTGTGAAATGTCAAAGACTTTATTTAATTGAAATAAAATTCAGGCGCTGTTTAAAGTTGAGGCTCCTTTGATGGG

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00134	Cyclin_N	Cyclin, N-terminal domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR006671	Domain	Cyclin, N-terminal	Interproscan
IPR012399	Family	Cyclin Y	Interproscan
IPR013763	Domain	Cyclin-like domain	Interproscan
IPR036915	Homologous_superfamily	Cyclin-like superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR14248	CYCLIN Y, ISOFORM A	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000079	Biological Process	regulation of cyclin-dependent protein serine/threonine kinase activity	Interproscan
GO:0005886	Cellular Component	plasma membrane	Interproscan
GO:0019901	Molecular Function	protein kinase binding	Interproscan
GO:0045859	Biological Process	regulation of protein kinase activity	Interproscan
GO:0060828	Biological Process	regulation of canonical Wnt signaling pathway	Interproscan
GO:0061575	Molecular Function	cyclin-dependent protein serine/threonine kinase activator activity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-