Detailed information of Csp22G006830.1 in Chaunax sp. Gene info
Gene IDAnnotationChromosomeStartEndStrand
Csp22G006830.1UNCHARACTERIZEDChr222188573121890102+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01139RtcBtRNA-splicing ligase RtcBFamilyInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR001233FamilyRNA-splicing ligase, RtcBInterproscan
IPR027513FamilyRNA-splicing ligase RtcB homologue, eukaryoticInterproscan
IPR036025Homologous_superfamilytRNA-splicing ligase RtcB-like superfamilyInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR11118UNCHARACTERIZEDInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0000971Biological Processobsolete tRNA exon ligation utilizing 2',3' cyclic phosphate of 5'-exon as source of linkage phosphateInterproscan
GO:0003972Molecular FunctionRNA ligase (ATP) activityInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006388Biological ProcesstRNA splicing, via endonucleolytic cleavage and ligationInterproscan
GO:0006396Biological ProcessRNA processingInterproscan
GO:0008452Molecular FunctionRNA ligase activityInterproscan
GO:0072669Cellular ComponenttRNA-splicing ligase complexInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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