Gene detail

Detailed information of Csp21G005740.1 in Chaunax sp. Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
Csp21G005740.1	PEROXISOMAL 2,4-DIENOYL-COA REDUCTASE	Chr21	11853789	11859461	-

Gene Structure

More details in Jbrowse Sequence

CDS

Transcript

Csp21G005740.1

GGTTTTTTGAGCAGGTACAGCAGCTAAGTGAATTTCACCTTATAGATGCGACAGCTAAAGGCTATTGGTTGCAGAATTAACACATGTTTACAGAGGtacacaaaataacaaacagcaGTGAAGTAGCCTACAACCCGGTAACATTTGGCCTCTGTTGGGCCCCGTACGCCGTTTCATTTGATTTAACGAAACCTTAGGATGCAAAATAGTGAGAGAAATATGTGTATCTGGATTAACTCTTAGTAAATCTGAGTTAGGGTCGAGTCACCTCACTGTTGATAATACAGTTCATAATATTTATTGTCAAATATTTATCTTTCAGATATTTGACACTCTCCTCTTGCCTCAAGGTTAAAGGTCTTTGGGCAAATGTGTCTGAGCTGTTTTAAATGACTTCTGGGCTGTTGTTGCTATTATGATTTACTTTAAGTTAAGTTCTGCAGGTGTaaagtcacaaaaaaaaaatcacgacATCATGTGCACATAGATGTTTAAAAATAGAAGATTAAACATAGATTCTTACTACAAACTACATGGTACAACATAATTAAGCTTTACCAAACTGTTGCAGGGCGCTATTGACCCATAATTATTTTGTGCAAAATAACAGAAATCGAAATAAATAAGATTTTGTACAAAAAGCCTTACACTTACCAGCCAGTCATTTAATGCATTGTGATTACGCAAATACGCAAGTACATCTCATTAACATTCATTGTTTATCAGCATGGCAGAGCCACAGAGAACAGGAGAATCGCTGCCCGAAGATGTTGGCACAGATGACTGCCTGACTTcttacacacacatctacagtcCAGATTTACTAAAGGATCAGGTTGCTTTTATTACAGGCGGTGGATCTGGAATTGGACTGAGGATAGCTGAAATCTTCATGAGGCATGGCTGTGATACAGTGATTGCGAGCAGGAACTTGGACAGGCTCAAAGAGGCAGCTGAAAAGCTGTCTGCTGTTTCAGGGCGGCGCTGTATCCCATTGTGTATAGATGTGAGGCAGCCTGAGAGCATTGCAGCTGCTGTGGATGAGACTCTGAGAGAGCTGGGCCGCATAGACATCCTCATTAACAatgCTGCTGGAAACTTCCTCTGTCCAGCTGCTGCACTATCCTTCAATGCCTTCAAGACAGTAATTGAAATCGATACTATGGGTACATTCAACACTAGCAAGGTGGTTTATGAGAAGTGGTTCAAGAATCATGGTGGCAACATAGTCAACATCTCTGCAACACTTGGATACAGGGGGCAGGGCCTCCAGGTGCATGCTGGCTCTGCTAAGGCTGCAAATGATGCTATGACCAAGCACCTGGCTGTGGAATGGGGCCCCAGTGGGGTGAGAGTCAATGCCGTGGCTCCAGGTCCCGTCTCTGGCACGGAGGGCTTCCGCAGACTGGGTGGTCTCAGGATGGAGACTGCCAGTGCGTTCCAGTCCATTCCTTTGCAGCGAGCAGGCAACAAGACAGAAATGGCCCACTGCACACTTTTCTTAGCCAGCCGGGCCTCCTCCTATGTGACCGGAGCCATCCTGGTGGCGGACGGCGGTTCGTGGTTGACCTCAGCCAATGACGTCTCAATGCTGCTGGgtTATTggtcatctgaaaagaaaagagacaatTGAATGCAGAAAATAAGAGTAATCTAGGGTCCACTTTTAGTACTGATATGCTACATGTATCTTTGAGGTTTATCTCACCTACTGTTACCTTAACAGTGCTTATTATTTGGAACACTACTGTAGCTACTAACTGTAtcacatgtactgtattataACTTTCCTATTCAGGGATTTGTCTCTTATTATGGTGCTGTGTATTCATCATGCATCTCATGTAGTCACGATTATCATGTGCCATTTAATCAGATTTTTCATCTCATTTATTGGTAAAACTTGTACAATTACAGTAAACAGTTACTACTGTTTGCCATTACATgtcattcttttttttggtcctaCTTTACCAAGAGTTTGGAAACCAATATTCTAGGGGTTACAGGTTGTTCTAAGAAAAAAATGGAACCTTTTTTGCCTCATTGTCGCCTTTTTCTTAATTGAATATTTGATACTATGAATAAATCAG

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13561	adh_short_C2	Enoyl-(Acyl carrier protein) reductase	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR002347	Family	Short-chain dehydrogenase/reductase SDR	Interproscan
IPR036291	Homologous_superfamily	NAD(P)-binding domain superfamily	Interproscan
IPR045017	Family	Peroxisomal 2,4-dienoyl-CoA reductase [(3E)-enoyl-CoA-producing]	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR43296	PEROXISOMAL 2,4-DIENOYL-COA REDUCTASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005777	Cellular Component	peroxisome	Interproscan
GO:0006631	Biological Process	fatty acid metabolic process	Interproscan
GO:0008670	Molecular Function	2,4-dienoyl-CoA reductase (NADPH) activity	Interproscan
GO:0009062	Biological Process	fatty acid catabolic process	Interproscan
GO:0016628	Molecular Function	oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-