Detailed information of Csp21G001750.1 in Chaunax sp. Gene info
Gene IDAnnotationChromosomeStartEndStrand
Csp21G001750.1THROMBOSPONDINChr2133874673403426-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00090TSP_1Thrombospondin type 1 domainDomainInterproscan
PF00093VWCvon Willebrand factor type C domainDomainInterproscan
PF02412TSP_3Thrombospondin type 3 repeatDomainInterproscan
PF05735TSP_CThrombospondin C-terminal regionFamilyInterproscan
PF07885Ion_trans_2Ion channelFamilyInterproscan
PF12947EGF_3EGF domainDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR000742DomainEGF-like domainInterproscan
IPR000884RepeatThrombospondin type-1 (TSP1) repeatInterproscan
IPR001007DomainVWFC domainInterproscan
IPR001779FamilyTwo pore domain potassium channel, TWIK-1Interproscan
IPR001881DomainEGF-like calcium-binding domainInterproscan
IPR003280FamilyTwo pore domain potassium channelInterproscan
IPR003367RepeatThrombospondin, type 3-like repeatInterproscan
IPR005408FamilyTwo pore domain potassium channel, TWIK familyInterproscan
IPR008859DomainThrombospondin, C-terminalInterproscan
IPR013099DomainPotassium channel domainInterproscan
IPR013320Homologous_superfamilyConcanavalin A-like lectin/glucanase domain superfamilyInterproscan
IPR017897RepeatThrombospondin, type 3 repeatInterproscan
IPR018097Conserved_siteEGF-like calcium-binding, conserved siteInterproscan
IPR024731DomainEGF domainInterproscan
IPR028974Homologous_superfamilyTSP type-3 repeatInterproscan
IPR036383Homologous_superfamilyThrombospondin type-1 (TSP1) repeat superfamilyInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR10199THROMBOSPONDINInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0005267Molecular Functionpotassium channel activityInterproscan
GO:0005509Molecular Functioncalcium ion bindingInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005576Cellular Componentextracellular regionInterproscan
GO:0007155Biological Processcell adhesionInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0016525Biological Processnegative regulation of angiogenesisInterproscan
GO:0062023Cellular Componentcollagen-containing extracellular matrixInterproscan
GO:0071805Biological Processpotassium ion transmembrane transportInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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