Detailed information of Csp20G007560.1 in Chaunax sp. Gene info
Gene IDAnnotationChromosomeStartEndStrand
Csp20G007560.1HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN U FAMILY MEMBERChr201780553917815853-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00622SPRYSPRY domainFamilyInterproscan
PF02037SAPSAP domainDomainInterproscan
PF13671AAA_33AAA domainDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR001870DomainB30.2/SPRY domainInterproscan
IPR003034DomainSAP domainInterproscan
IPR003877DomainSPRY domainInterproscan
IPR013320Homologous_superfamilyConcanavalin A-like lectin/glucanase domain superfamilyInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR035778DomainHeterogeneous nuclear ribonucleoprotein U, SPRY domainInterproscan
IPR036361Homologous_superfamilySAP domain superfamilyInterproscan
IPR043136Homologous_superfamilyB30.2/SPRY domain superfamilyInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR12381HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN U FAMILY MEMBERInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0000122Biological Processnegative regulation of transcription by RNA polymerase IIInterproscan
GO:0000228Cellular Componentnuclear chromosomeInterproscan
GO:0000381Biological Processregulation of alternative mRNA splicing, via spliceosomeInterproscan
GO:0000776Cellular ComponentkinetochoreInterproscan
GO:0000978Molecular FunctionRNA polymerase II cis-regulatory region sequence-specific DNA bindingInterproscan
GO:0001097Molecular FunctionTFIIH-class transcription factor complex bindingInterproscan
GO:0003714Molecular Functiontranscription corepressor activityInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005697Cellular Componenttelomerase holoenzyme complexInterproscan
GO:0005813Cellular ComponentcentrosomeInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0016363Cellular Componentnuclear matrixInterproscan
GO:0016607Cellular Componentnuclear speckInterproscan
GO:0017069Molecular FunctionsnRNA bindingInterproscan
GO:0017130Molecular Functionpoly(C) RNA bindingInterproscan
GO:0032211Biological Processnegative regulation of telomere maintenance via telomeraseInterproscan
GO:0034046Molecular Functionpoly(G) bindingInterproscan
GO:0036002Molecular Functionpre-mRNA bindingInterproscan
GO:0036464Cellular Componentcytoplasmic ribonucleoprotein granuleInterproscan
GO:0043021Molecular Functionribonucleoprotein complex bindingInterproscan
GO:0045944Biological Processpositive regulation of transcription by RNA polymerase IIInterproscan
GO:0070934Biological ProcessCRD-mediated mRNA stabilizationInterproscan
GO:0070937Cellular ComponentCRD-mediated mRNA stability complexInterproscan
GO:0071013Cellular Componentcatalytic step 2 spliceosomeInterproscan
GO:0098577Cellular Componentinactive sex chromosomeInterproscan
GO:0099122Molecular FunctionRNA polymerase II C-terminal domain bindingInterproscan
GO:1901673Biological Processregulation of mitotic spindle assemblyInterproscan
GO:1902275Biological Processregulation of chromatin organizationInterproscan
GO:1902425Biological Processpositive regulation of attachment of mitotic spindle microtubules to kinetochoreInterproscan
GO:1990023Cellular Componentmitotic spindle midzoneInterproscan
GO:1990280Biological ProcessRNA localization to chromatinInterproscan
GO:1990498Cellular Componentmitotic spindle microtubuleInterproscan
GO:1990841Molecular Functionpromoter-specific chromatin bindingInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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