Detailed information of Csp20G000670.1 in Chaunax sp. Gene info
Gene IDAnnotationChromosomeStartEndStrand
Csp20G000670.1TATA BOX-BINDING PROTEIN-ASSOCIATED FACTOR RNA POLYMERASE I SUBUNIT BChr2015378811545990-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF11781zf-RRN7Zinc-finger of RNA-polymerase I-specific TFIIB, Rrn7DomainInterproscan
PF20644Rrn7_cyclin_NRrn7/TAF1B, N-terminal cyclin domainDomainInterproscan
PF20645Rrn7_cyclin_CRrn7/TAF1B, C-terminal cyclin domainDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR021752DomainTranscription initiation factor Rrn7, Zinc-fingerInterproscan
IPR033599FamilyRNA polymerase I transcription initiation factor TAF1B/Rrn7Interproscan
IPR048538DomainRrn7/TAF1B, C-terminal cyclin domainInterproscan
IPR048540DomainRrn7/TAF1B, N-terminal cyclin domainInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR31576TATA BOX-BINDING PROTEIN-ASSOCIATED FACTOR RNA POLYMERASE I SUBUNIT BInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0001164Molecular FunctionRNA polymerase I core promoter sequence-specific DNA bindingInterproscan
GO:0001188Biological ProcessRNA polymerase I preinitiation complex assemblyInterproscan
GO:0005668Cellular ComponentRNA polymerase transcription factor SL1 complexInterproscan
GO:0006360Biological Processtranscription by RNA polymerase IInterproscan
GO:0042790Biological Processnucleolar large rRNA transcription by RNA polymerase IInterproscan
GO:0070860Cellular ComponentRNA polymerase I core factor complexInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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