| Gene ID | Annotation | Chromosome | Start | End | Strand |
|---|---|---|---|---|---|
| Csp18G003790.1 | E3 UBIQUITIN-PROTEIN LIGASE TRIM36-RELATED | Chr18 | 11009487 | 11022056 | + |
| CDS | |||||
| Csp18G003790.1 | |||||
| Transcript |
| Csp18G003790.1 |
| Protein |
| Csp18G003790.1 |
| Gene family | Subfamily |
|---|---|
| Ubiquitin Family | E3|E3 activity RING|RING |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00097 | zf-C3HC4 | Zinc finger, C3HC4 type (RING finger) | Domain | Interproscan |
| PF00643 | zf-B_box | B-box zinc finger | Domain | Interproscan |
| PF18568 | COS | TRIM C-terminal subgroup One Signature domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR000315 | Domain | B-box-type zinc finger | Interproscan |
| IPR001841 | Domain | Zinc finger, RING-type | Interproscan |
| IPR003961 | Domain | Fibronectin type III | Interproscan |
| IPR013083 | Homologous_superfamily | Zinc finger, RING/FYVE/PHD-type | Interproscan |
| IPR013320 | Homologous_superfamily | Concanavalin A-like lectin/glucanase domain superfamily | Interproscan |
| IPR013783 | Homologous_superfamily | Immunoglobulin-like fold | Interproscan |
| IPR017903 | Domain | COS domain | Interproscan |
| IPR018957 | Domain | Zinc finger, C3HC4 RING-type | Interproscan |
| IPR036116 | Homologous_superfamily | Fibronectin type III superfamily | Interproscan |
| IPR040859 | Domain | Midline-1, COS domain | Interproscan |
| IPR043136 | Homologous_superfamily | B30.2/SPRY domain superfamily | Interproscan |
| IPR050617 | Family | E3 ubiquitin-protein ligases and FN3/SPRY domain-containing proteins | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR24099 | E3 UBIQUITIN-PROTEIN LIGASE TRIM36-RELATED | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0001578 | Biological Process | microtubule bundle formation | Interproscan |
| GO:0001764 | Biological Process | neuron migration | Interproscan |
| GO:0005515 | Molecular Function | protein binding | Interproscan |
| GO:0007409 | Biological Process | axonogenesis | Interproscan |
| GO:0008270 | Molecular Function | zinc ion binding | Interproscan |
| GO:0044304 | Cellular Component | main axon | Interproscan |
| GO:0046872 | Molecular Function | metal ion binding | Interproscan |
| GO:0048490 | Biological Process | anterograde synaptic vesicle transport | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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