Gene detail

Detailed information of Csp15G006900.1 in Chaunax sp. Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
Csp15G006900.1	UBIQUITIN CARBOXYL-TERMINAL HYDROLASE	Chr15	18724709	18750535	-

Gene Structure

More details in Jbrowse Sequence

CDS

Transcript

Csp15G006900.1

CACAGTATACGGTGGGCGGGCATTGCGAAGCTGTAGTTGAATGTTAGCAGGCTAACTAGAGAAAGAAAGCTAACTAATCGTGAGATTGGAAGAGGAGCTAACGTTAAAGGAAAAAGGCACCTGTCAAAACAGCAAGGGGAAAATAAATTTTAGTTAAGTGATAGTTCTGTTAGTTGACTACATGAACAGAATTGTATCTAGTTATTTAAAGACCGTGTTTGTCAGATGCCCGAGGAGCATTTTGGATACTACATCGATCGTCCCATTCCAAACGGAAACCATATCTGGACAGACAGTTCGTGCTAGCCAGCTAGTTAAGTGAATCATCTAGGAGACGTTTCGTTGTCACCTATAAACTAAGACTGAATGTTTTGTCTGTCATGAGTCCGACCGGGTGCTCCCATGTGAACGGTTATAAGGTGGATAATTGGAAACAAAATCTTCGAGTCATATACCAATGCTTTGTTTGGAGTGGTACTGCTGAGACGAGGAGACGCAAGGTGCTTCAGAGTGATGCAGGATGGACAGTGCTGGCCAAGTCGTGTATCTGTCACATGTGTGGTGCCCACCTGAACCGACTCCACTCTTGTCTCTACTGCGTCTTTTTCGGCTGTTTTACGAAGAAACACATCCACGAGCACGCCAAAAACAAGAGACACAATCTAGCGATAGACTTACTATACGGTGGAAtatattgttttgtgtgtcaggACTACATATACGACAAAGACATGGAACAAATCGCCAAAGAGGAACAGAGGAAAGCTTGGAAATTGCAAGGCATAGGGGAGAAATTCACAACATGGGAGCCGACAAAGCGGGAGCTAGAATTACTACGACACAATCCAAAGCGGAGGAAAATCACGACAAACTGTACCATAGGTTTACGAGGGTTAATAAACCTGGGCAACACATGTTTCATGAACTGTATTGTTCAGGCCCTAACGCACACACCACTGCTGCGAGACTTCTTTCTCTCCGACAGACACAAATGCGATATGCAATCAAACTCCTGTCTGGTGTGTGAGATGTCGCAGCTCTTTCAGGAGTTCTACTCGGGCCACCGTTCGCCCCACATTCCCTTCCGGCTGCTGCACCTGGTGTGGACTCATGCACGTCACCTCGCAGGCTACGAGCAGCAAGACGCCCACGAGTTCCTCATCGCAGCATTGGATGTACTACATAGGCACTGCAAAGGGGACACCATCAGAGATGACAATGGGAAGAAGGCCAACAATCCAAACCACTGTAACTGCATCATTGACCAAATCTTCACTGGAGGCCTGCAATCAGATGTTACCTGTCAAGTTTGCCATGGGGTTTCCACAACGATAGATCCATTCTGGGACATCAGTCTAGACCTTCCTGGCTCATCCACGCCCTTCTGGCCCCTCAGCCCTGGAGGGGATGGCAGCACAGTGAACGGAGAGAGTCACCTGTCAGGGTCCACCACACTCACAGACTGCCTACGAAGGTTTACACGGCCAGAGCATCTAGGAAGCAGTGCCAAAATCAAGTGTGGCGGTTGCCATAGTTACCAGGAGTCCACCAAACAGCTGACAATGAAGAAGCTCCCCATCGTAGCATGTTTCCATCTCAAACGGTTTGAGCACTCTGCCAAACTGCGGAGGAAGATCACTACATACGTTTCCTTCCCTCTAGAGCTGGACATGACGCCCTTCATGGCATCCAGTAAAGAGAGCAGAATGAACGGACAGTATCAACAGACGGTTGATGTATTGAACAACGATAATAAGTATTCCTTGTTTGCGGTGGTTAACCACCAAGGCACATTAGAAAGTGGCCACTACACCAGCTTCATCCGTCAGCACAAAGATCAGTGGTTCAAATGTGACGATGCGATAATCACCAAGGCCAGCATTAAAGACGTACTTGATAGTGAAGGGTATCTCTTATTCTACCATAAACAGTTCCTTGAGTATGAGTAGTCTTTGTGACCGCTGACCATGAGGAACCACTGCTTCAAATTCGAGAGTCAAGGGACTGGGGACaggatgaaacagaaaacacacaaacctaccTGAAACTCTTGACTTACCAGTCTACTCCTGCGGCTCTGGAGGAGAGCAATCAAAAGACGTGTGAAATCATGCAACCttccaaaagagagagagagagagacagagagagagagaaagaaaacaaaagcactGAGCTACTTCTTGGTATCTTCTCGGCAAAACTGAatgaagagaagaggaagaagaagaagaagaagagtcagGGCAGAGGGAAGAGGCCCCACAcccctcacactctctctcctgCCCCCTTCCTGCTGCAGGGACACGGTCTAAGTGTGAACAGCAGTCATGTTGATTGGGCAcatctgggttttttttcttccccttaCAGTATTCTgactccccacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacactctcccccCATGGTGCTCTCATTTCAACTGACCAAGCATTTAACTTGTTCATGATGGAAGACAAGTGTGTTGTCATATGCATATGGGACTgaacaaaaaaattaataagAATAGAATCAACGTATTATGAACTTTGCaaggacatttttaaaagtatggTTATGATTCTTATCATTTGTGACTTTAGTtatgaaatactgtataaatcTAGTATGCATCTATTTTTTAAGAACATAAAAAATATTGGAGAGCTCAGAGACGCTGCCTTTGCCAGTGGCTGGGGAAGTGCTGCCATGGAAACTAAGCAGATTTGGACCTGAGTGTGCTCATGTTCCATTATTTACTGtgttgattgttttatttttaagtctGGTTGAGGGCAGGGAATATCTATTTTTTTAGCAACTCAATGAATTATGAGCATTTGTTTACTGTTCTTTTcagtgtctttattttttttaaagttttcagTACACTCACATGTCCCTCGCTTTCCTAGTACTGGAAATGTTTTTGGACGTATTATACATTCATTCTTGTGGAATTGTTGGtataatgatggtgatgattaAATCTGctcacctgttttttttttcctttctttttttttttttgttgctgtttatGAATTTGTATGTTGAATGTGAGCTTTGGGTTTCATATGGCATTTTGAAGAGAAGACTCGATACATGAACTCCAGATGAGGGTCCTATAATAATGCTGTGGTCTGTCTTCATTGAACACCTTGAATGTTCTGTgcaagaagagaggaaaaaaaacacatttaacaacACTGCATGCGACTGGGCTCTCATGAGCTTATATAATGTGAAAAATTGCACCCAATAATGCCTCAAGGCCTGCTGCCCATGTTTGTTCAGTTTTGCAATGGGAAGATGATCATGCGAGATACATAGATGGTAAAACACATTTCACATATATTGGAACTGTGCGACCAACAGGCTGGCTCTGAATTCGTCAGTGTTAATCTTCTCCATGGCAACTGGGCGGCAGGTCTAGACCGGTTTGGTTCATGGTGAGTCTTTGCCTCTGCAGTGCAGTAAACCCAGTGCTCTATTCAATCAGTATGCTGTCAAGTCAGACTTCAGgtaatacacatacacatcagGGTGTTGTGGTTTGTTGTGTCGTATCACTGATTGtgtatgtataaaaaaaaaaaatactgaataaaaaGTCACTTATGTATAAGATGAGGGCTTTAACTTGTCACAAAAGTAATACCACATCAAAACCACAACCCCTGTTTGTTTAGCTGCTCTGTAATTGAAAATTAACATGCATATCCTTAGGTCTGCTGCTAAACCTCAGCTACAGTGCATCAGTGGGTTTctgatccataaaaaaaaaaaaaaatcaaagactTCTGTAATGGTCGCACTATGGTATTGATGTTTCACAAAGCACTCAAGGCCACCCAAGGACATTCAGGGACAGAGCTGAAACgaaaaggaagaggagagcTTCATT

Protein

Gene family

Gene family	Subfamily
Ubiquitin Family	DUB\|USP\|USP

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00443	UCH	Ubiquitin carboxyl-terminal hydrolase	Family	Interproscan
PF02148	zf-UBP	Zn-finger in ubiquitin-hydrolases and other protein	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001394	Domain	Peptidase C19, ubiquitin carboxyl-terminal hydrolase	Interproscan
IPR001607	Domain	Zinc finger, UBP-type	Interproscan
IPR013083	Homologous_superfamily	Zinc finger, RING/FYVE/PHD-type	Interproscan
IPR018200	Conserved_site	Ubiquitin specific protease, conserved site	Interproscan
IPR028889	Domain	Ubiquitin specific protease domain	Interproscan
IPR038765	Homologous_superfamily	Papain-like cysteine peptidase superfamily	Interproscan
IPR050185	Family	Ubiquitin carboxyl-terminal hydrolase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR21646	UBIQUITIN CARBOXYL-TERMINAL HYDROLASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004843	Molecular Function	cysteine-type deubiquitinase activity	Interproscan
GO:0008270	Molecular Function	zinc ion binding	Interproscan
GO:0016579	Biological Process	protein deubiquitination	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-