Gene detail

Detailed information of Csp15G004850.1 in Chaunax sp. Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
Csp15G004850.1	AGAP004733-PA	Chr15	14827802	14834698	-

Gene Structure

More details in Jbrowse Sequence

CDS

Transcript

Csp15G004850.1

ATGGCCCAGACCCTCCAGATGGCGATCCCAAACTTTGGCAACAATGTTTTAGAGTGCCTGAACGAGCAGCGGCTGCAGGGCCTCTACTGTGATGTCTCCGTGGTGGTCAAGGGCCATGCCTTCAAGGCCCATCGAGCTGTGCTGGCTGCTAGCAGTTCTTATTTCCGGGACCTTTTCAGCAGCAATACTGGAGGTGGTAGCAGCAATGAGACAAGCCCAACCGTAGTTGAGCTCCCTTCGGCTGTGCAGCCCCAGAGCTTCCAGCAGATACTGGCCTTCTGCTACACAGGCCGTCTCAGCATGACGGTGGGGGACCAGTTTCTCCTCATGTATACTGCTGGCTTCCTGCAGATCCAACAGATCATGGAAAAAGGCACTGAATTCTTCCTCAAGGTCTCCTCCCCCAGCTGTGACTCCCAGGGCCTTCACGCTGAGGACGCCCCACCTTCTGAGCCCCAGAGCCCTGTAACGCAGACCAGTAACAGTGCAACCCGCCCGACCTCCTGCCTCACGCCCCTCTCTCTCGTATCACGAGTGAAGACAGAGCAGCCTGCTAGCCATCCTGAAGCAGCCACTCCTTACTCAGTGGTCTGCACTCCTGTAGCCAAGCGGCTTTGGGAGGGTGGCAGCAGTCGAGATGGAGCCGGGGTAGGCtcagggggaggaggaggggccaGAAAAGCTGCGCGTTATTCCCAGGAGGTGGTGCGTGGCTGTGCGATTCAGAGCCCAGGGGCCCTCGGACTGGCCATGAGTATGGGCGCCACCGCAACCAGCCTGGCAGGCATGGTGGCTAGTGGCGGGATGAATGGCAGCAGCGGAACCAATGGGAGCTCTGCAGCAGGACTCGGCATGTCGGAGGGCGCCAGCCCCGGCACCCTGAGTACCTACGCCAGTGACTCCCCCATCAGCTaccatgatgatgaagaagaggaagaggggacAGATGAAAGTGCTGAAGAGCAATACAGGCAAATCTGCAACATGTACACCATGTACAGCATGCTGAATATGGGAGCTACAGCCGCTGGTGAGCGTGTTGAAGCTCTACCGGACCACACAGAGACGAGGGGCCGGATGCGAGGCAGAGACCTTACGTGTCTCCCTGCAGAACTCATCGCTCAGATAGGCAACCGCTGTCATCCCAAACTGTACGAAGAAGGAGACCCTGCTGAGAAAATAGAGTTAGTCTCAGGTACGTCTGTGTATATATCGCGAGCCCAGCTAATGAACTGTCACGTGAGCGCAGGGACCAGACACAAGGTGCTGCTGAGGCGGCTACTGGCTGCCTTCTTTGACAGGAACACTCTGGCCAACAGCTGCGGGACAGGTATCCGTTCATCAACCAATGACCCGAGCCGCAAGCCCCTTGACAACAGAGTTCTGCATGCGGTCAAATATTATTGCCAGAACTTTGCCACCAGCTTCAAAGAGAGCGAGATGAACGCAATTGCGGCCGACATGTGCACCAACGCCCGGCGCGTTGTCCGGAAGAGCTGGATCCCCAAGCTGAAGCTACTGATGGCCGAGAGCGATGCCTACAACGCTTTCCTTCCCGATGGTGTCAAGGTGGAGGATGACACCTTGGGGGCGGATCCAGCCTTCGACCCTGCCTCTCTGGAGGCCAACGGCGGCGCTGGCATGGAGTCAGGTGGCTCCTCAGGTGAATCGCTACAAGGTGTGGGCGGGGATGGAGgacatttattttgaacattgtGTCTGGGGGAAAAGGTTGAAATTTAGTGACACACATACCAGTATTCCCCAGTTCTGCTTGCCTCCTCACTCTGGCCCACGCTGATCTCTCACATGTGACTGTCTATGCTACACTTTTAGGGTCAACAGTTGTTGTTACCCTGGTGTGACCAGGACATGAAAACTTAAATTCTTGCTTTATGACTGTACAGTGGAGTTATCTGAAAGGGAGAGAGTAAGAGGATGTTAACTTTTCTCCTAACTGCCCTCTGCCTCCCCTTGTCTTTGCAAGGTGTACAAGTGCATCCACTCTTGCATATTAAATACATTCCCTGAATTGCTTGTGAAGGGAGGGGCTCGTGCAGCCAGAGGAGGAAGGGATGGCTGGACGGACAGGCTAGGATAAGAGGTGGCGAGTAAATTGAATGTAAATGTCAGTGGCATTTTTCTTTATGCTCTGACAAGTCGTATTCCAGCCTCGGAAAAAGGAactaaatttaaaatgaatacaGTAATAAAAGAAGTTAATACTACCTGTTCTTCCTCCCCTTGCACCTTCCACTCATCATACTGCAAGTACTCCTCAACCCACATCGCCTCTCTTGAGACCGGAGAATCTCACCTGAGTGTTTCACTGTGCAGTGTCTTACAGAAATGTAGCTCATCTTTCTGACATTTAGCATGTTTCTGTCTATGAAGTGACCCAGAGAGAAGGGCAAAGCTTTTTACTTAGACTGATTGTAAAGAAGATTCAAAAGCAATGGG

Protein

Gene family

Gene family	Subfamily
Transcription Factors Family	ZBTB
Ubiquitin Family	E3\|E3 adaptor Cullin RING\|BTB

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00651	BTB	BTB/POZ domain	Domain	Interproscan
PF10523	BEN	BEN domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000210	Domain	BTB/POZ domain	Interproscan
IPR011333	Homologous_superfamily	SKP1/BTB/POZ domain superfamily	Interproscan
IPR018379	Domain	BEN domain	Interproscan
IPR050457	Family	Zinc finger and BTB domain-containing	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46105	AGAP004733-PA	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000978	Molecular Function	RNA polymerase II cis-regulatory region sequence-specific DNA binding	Interproscan
GO:0000981	Molecular Function	DNA-binding transcription factor activity, RNA polymerase II-specific	Interproscan
GO:0003677	Molecular Function	DNA binding	Interproscan
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0006357	Biological Process	regulation of transcription by RNA polymerase II	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-