Detailed information of Csp13G006830.1 in Chaunax sp. Gene info
Gene IDAnnotationChromosomeStartEndStrand
Csp13G006830.1NUCLEAR HORMONE RECEPTORChr131500944615017586+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
Transcription Factors FamilyESR-like
Transcription Factors FamilyNGFIB-like
Transcription Factors FamilyRXR-like
Transcription Factors FamilySF-like
Transcription Factors FamilyTHR-like
Transcription Factors FamilyGCNF-like

Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00104Hormone_recepLigand-binding domain of nuclear hormone receptorDomainInterproscan
PF00105zf-C4Zinc finger, C4 type (two domains)DomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR000536DomainNuclear hormone receptor, ligand-binding domainInterproscan
IPR001628DomainZinc finger, nuclear hormone receptor-typeInterproscan
IPR001723FamilyNuclear hormone receptorInterproscan
IPR003074FamilyPeroxisome proliferator-activated receptorInterproscan
IPR013088Homologous_superfamilyZinc finger, NHR/GATA-typeInterproscan
IPR035500Homologous_superfamilyNuclear hormone receptor-like domain superfamilyInterproscan
IPR050234FamilyNuclear hormone receptor family NR1 subfamilyInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR24082NUCLEAR HORMONE RECEPTORInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0000122Biological Processnegative regulation of transcription by RNA polymerase IIInterproscan
GO:0000978Molecular FunctionRNA polymerase II cis-regulatory region sequence-specific DNA bindingInterproscan
GO:0001227Molecular FunctionDNA-binding transcription repressor activity, RNA polymerase II-specificInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0003700Molecular FunctionDNA-binding transcription factor activityInterproscan
GO:0004879Molecular Functionnuclear receptor activityInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0006631Biological Processfatty acid metabolic processInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0009755Biological Processhormone-mediated signaling pathwayInterproscan
GO:0010887Biological Processnegative regulation of cholesterol storageInterproscan
GO:0019216Biological Processregulation of lipid metabolic processInterproscan
GO:0030154Biological Processcell differentiationInterproscan
GO:0043565Molecular Functionsequence-specific DNA bindingInterproscan
GO:0045923Biological Processpositive regulation of fatty acid metabolic processInterproscan
GO:0045944Biological Processpositive regulation of transcription by RNA polymerase IIInterproscan
GO:0050728Biological Processnegative regulation of inflammatory responseInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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