Detailed information of Csp13G006340.1 in Chaunax sp. Gene info
Gene IDAnnotationChromosomeStartEndStrand
Csp13G006340.1HL01030P-RELATEDChr131404806814085715+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
Ubiquitin FamilyE3|E3 activity RING|PHD

Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00628PHDPHD-fingerDomainInterproscan
PF00856SETSET domainFamilyInterproscan
PF01079HintHint moduleFamilyInterproscan
PF01085HH_signalHedgehog amino-terminal signalling domainDomainInterproscan
PF05964FYRNF/Y-rich N-terminusFamilyInterproscan
PF05965FYRCF/Y rich C-terminusFamilyInterproscan
PF13771zf-HC5HC2HPHD-like zinc-binding domainDomainInterproscan
PF13832zf-HC5HC2H_2PHD-zinc-finger like domainDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR000320DomainHedgehog, N-terminal signalling domainInterproscan
IPR001214DomainSET domainInterproscan
IPR001657FamilyHedgehog proteinInterproscan
IPR001767DomainHedgehog protein, Hint domainInterproscan
IPR001965DomainZinc finger, PHD-typeInterproscan
IPR003586DomainHint domain C-terminalInterproscan
IPR003587DomainHint domain N-terminalInterproscan
IPR003616DomainPost-SET domainInterproscan
IPR003888Conserved_siteFY-rich, N-terminalInterproscan
IPR003889Conserved_siteFY-rich, C-terminalInterproscan
IPR006141PTMIntein N-terminal splicing regionInterproscan
IPR009045Homologous_superfamilyHedgehog signalling/DD-peptidase zinc-binding domain superfamilyInterproscan
IPR009071DomainHigh mobility group box domainInterproscan
IPR011011Homologous_superfamilyZinc finger, FYVE/PHD-typeInterproscan
IPR013083Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR019787DomainZinc finger, PHD-fingerInterproscan
IPR034732DomainExtended PHD (ePHD) domainInterproscan
IPR036844Homologous_superfamilyHint domain superfamilyInterproscan
IPR036910Homologous_superfamilyHigh mobility group box domain superfamilyInterproscan
IPR046341Homologous_superfamilySET domain superfamilyInterproscan
IPR047000DomainKMT2D, PHD3 domainInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR45888HL01030P-RELATEDInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0003713Molecular Functiontranscription coactivator activityInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0007267Biological Processcell-cell signalingInterproscan
GO:0007275Biological Processmulticellular organism developmentInterproscan
GO:0016539Biological Processintein-mediated protein splicingInterproscan
GO:0016540Biological Processprotein autoprocessingInterproscan
GO:0042393Molecular Functionhistone bindingInterproscan
GO:0042800Molecular Functionhistone H3K4 methyltransferase activityInterproscan
GO:0044666Cellular ComponentMLL3/4 complexInterproscan
GO:0045944Biological Processpositive regulation of transcription by RNA polymerase IIInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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