Gene detail

Detailed information of Csp13G002120.1 in Chaunax sp. Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
Csp13G002120.1	SOLUTE CARRIER FAMILY 13 MEMBER	Chr13	4613311	4628118	+

Gene Structure

More details in Jbrowse Sequence

CDS

Transcript

Csp13G002120.1

CGCCTCCTAACTGGCGCCTCTAAACTGAAGCTCCATTTCGCCATACGAAACAAAAGTCCGCTCAGGAGATGAAAATATCAGCTGTGTCCAAGAAGCTGCGGTGCGTCCACAAACAAgtggtcctcctcctctctccgcTGGTCTTCCTACCCATACTTTTTACTCTACCGGAAAAGgAAGGAAAATGTCTTTATGTGGTGGCTCTGATGGCTGCGTTTTGGTGCACAGAAGCCCTTCCTCTGGCTATCACCGCAAtgcttcctctctgcctcttccCAACATTGGGAATTCTTCCTTCCAAGATACTATGCCCTCAGTACTTCCTTGAAACCAATTTTCTCTTCCTGAGCGGTCTTGTGATGGCCTCGTCAATCGAGGAGTGTGGCCTGCATCGCAGAATAGCCCTTAAGGTCCTTAGTATTGTCGGAGTACAACCAGcatgGCTCATAATGGGGATGATGATAACCTCATCCTTCCTGTCCATGTGGCTCAGCAACACTGCCACAACAGCCATGATGCTCCCTATTGCTAATGCCATCCTGGAGAGTCTGTTTGGAGACCTGGAGACACTGAAAGAGAAGTGCAAATCCAAAGACAATCCTGAGGTTGATATAATAAATGGTCACTCTACTGTAATGCTGCATTCACTGCCCTtggaaacacaaaaactttCATCAGATGGCATGGCTGGGATGGAGCAGAGCGACATGGGGACACCTGAGGAGATACGATCAGAGGCACACCATCAGCTTCAGGTGTGGAAAGGATTCTTGATCTGCATTCCTTATGCAGCCAGTATCGGAGGAACTGCCACGCTGACCGGCACCACGCCCAACCTCATCTTCATTGGACAGCTGAAAAGCCACTTTCCAGACTGCGACCTCATCAATTTTGGCTCTTGGTTTGCTTTCGCTTTGCCGCTCATgcttctcttcctgtttttggGATGGATTTGGATCTCGTTTCTCTACGGAGGATTGAATTTAAAGTCGTGCTTCAGGAAAAACAACCTTCGAGCCCAGGCAGAGGCCAGAGCAAAAACTGTCATAGAGGAAGATTACAGAAAACTCGGACCCATGAATTTTGCAGAGGGAGCGAtcagttttttctttgtattgTTTGCCATTCTTCTTTTCACAAGAGATCCCAAATTTTTCTCTGGCTggtctgtgttttttaaaaaaggGTACGTGTCAGACGCAGTCACTGGTGTGATCATTGTGTCTATATTGTTCTTCTTCCCCTCACAGAAACCTTCTCTAAGTTGGTGGTTCGACCCTCAAGCACCAAACATTCCATATGTACCCCTCTTATCATGGAAGAAAGCCCAGGATTCTGTTCCCTGGAATATCATTCTGCTCCTGGGAGGTGGCTTTGCTATGGCTAAAGCTTGTGAGGAGTCTGGACTCTCCGCCTGGATAGGAGGCCACCTCCGACCTTTGGCCGAGGtccctcctgctgcagctgtgaTGTTGATCATTGGTTTCGTGGCCTGTTTCACTGAGGTTGCCAGCAACACTGCCACAATTATCATATTTTTACCCATCATTGTTGAACTGGCTATTAACGTGTCGATAAACCCTCTGTACTTCATGGTGCCTGCAACAGTCGGATGTTCATACGCCTTCATGCTGCCAGTGTCCACGCCGCCCAACTCCATCGCCTTCGCAACAGGACACCTCATGGTCAAAGACATGgtgaagACCGGCATTGTCATGAACATTCTGGgtatcctctctgtctctctggccATTAACACGTGGGGTGTGGCCATGTTTGACTTAAACACATTTCCAGAATGGGCCGACTCTGGCAACAAGTCTGCTGGTGTTATTGGCGTTCAGTCACTCAATGCGACCCTCTGATCACTCACTCACTAGTATCAGAGGATTGTATGAAAGTTTAACACTACACCGGGACAAATGTCTGTCTGTAGATGTCTCTGGGTTACAATAATGGCAGAATTATACCTAAGTGTAGGATCTGAAAGGTCAAGAGTTCAGGATGTTGATGAACACTccatgttttaaattaaaaaataacattttcacctcgacaacaacaaaaggcaaaggttgtttttttatatgtatatttgaaACTGCAGAGTACTGTTTGTATTGATGCTACTAGGCTCACGTCTGCTGTAAGAATGAGAGAGACCTCTGTGAATAACTCTTTTAGAATATATAGATTCATGATCATGTTACTTGTTAATTTATAATATGATGAATGCTGCTATAGCACAAATGATTTCAGATCTTGTCTACATTAGATTATGAACCTTTACTAATGAATATGaacattttgttacattttgtgATTTCAATTCATA

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00939	Na_sulph_symp	Sodium:sulfate symporter transmembrane region	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001898	Family	Solute carrier family 13	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10283	SOLUTE CARRIER FAMILY 13 MEMBER	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0015137	Molecular Function	citrate transmembrane transporter activity	Interproscan
GO:0015141	Molecular Function	succinate transmembrane transporter activity	Interproscan
GO:0015746	Biological Process	citrate transport	Interproscan
GO:0016020	Cellular Component	membrane	Interproscan
GO:0016021	Cellular Component	membrane	Interproscan
GO:0017153	Molecular Function	sodium:dicarboxylate symporter activity	Interproscan
GO:0022857	Molecular Function	transmembrane transporter activity	Interproscan
GO:0055085	Biological Process	transmembrane transport	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-