| Gene ID | Annotation | Chromosome | Start | End | Strand |
|---|---|---|---|---|---|
| Csp11G000690.1 | UBIQUITIN LIGASE E3 ALPHA-RELATED | Chr11 | 1206249 | 1230468 | - |
| CDS | |||||
| Csp11G000690.1 | |||||
| Transcript |
| Csp11G000690.1 |
| Protein |
| Csp11G000690.1 |
| Gene family | Subfamily |
|---|---|
| Ubiquitin Family | E3|E3 activity|N-domain |
| Ubiquitin Family | E3|E3 activity RING|RING |
| Ubiquitin Family | E3|E3 activity|UBR-box |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF02207 | zf-UBR | Putative zinc finger in N-recognin (UBR box) | Family | Interproscan |
| PF02617 | ClpS | ATP-dependent Clp protease adaptor protein ClpS | Family | Interproscan |
| PF18995 | PRT6_C | Proteolysis_6 C-terminal | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR003126 | Domain | Zinc finger, UBR-type | Interproscan |
| IPR003769 | Domain | Adaptor protein ClpS, core | Interproscan |
| IPR014719 | Homologous_superfamily | Ribosomal protein bL12, C-terminal/adaptor protein ClpS-like | Interproscan |
| IPR036390 | Homologous_superfamily | Winged helix DNA-binding domain superfamily | Interproscan |
| IPR039164 | Family | E3 ubiquitin-protein ligase UBR1-like | Interproscan |
| IPR042065 | Homologous_superfamily | E3 ubiquitin-protein ligase ELL-like | Interproscan |
| IPR044046 | Domain | E3 ubiquitin-protein ligase UBR-like, C-terminal | Interproscan |
| IPR047508 | Domain | E3 ubiquitin-protein ligase UBR2, UBR-box | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR21497 | UBIQUITIN LIGASE E3 ALPHA-RELATED | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0008270 | Molecular Function | zinc ion binding | Interproscan |
| GO:0030163 | Biological Process | protein catabolic process | Interproscan |
| GO:0061630 | Molecular Function | ubiquitin protein ligase activity | Interproscan |
| GO:0071596 | Biological Process | ubiquitin-dependent protein catabolic process via the N-end rule pathway | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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