Detailed information of Csp10G009440.1 in Chaunax sp. Gene info
Gene IDAnnotationChromosomeStartEndStrand
Csp10G009440.1UNCHARACTERIZEDChr102944110929449433+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
Ubiquitin FamilyE3|E3 activity RING|RING
Ubiquitin FamilyUBD|Alpha-Helix|UMI

Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00097zf-C3HC4Zinc finger, C3HC4 type (RING finger)DomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR001841DomainZinc finger, RING-typeInterproscan
IPR013083Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR018957DomainZinc finger, C3HC4 RING-typeInterproscan
IPR034725FamilyE3 ubiquitin-protein ligase RNF168Interproscan
IPR051657FamilyRNF168/RNF169 E3 ubiquitin-protein ligaseInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR23328UNCHARACTERIZEDInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0004842Molecular Functionubiquitin-protein transferase activityInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006302Biological Processdouble-strand break repairInterproscan
GO:0016567Biological Processprotein ubiquitinationInterproscan
GO:0031491Molecular Functionnucleosome bindingInterproscan
GO:0035861Cellular Componentsite of double-strand breakInterproscan
GO:0046872Molecular Functionmetal ion bindingInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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