Gene ID | Annotation | Chromosome | Start | End | Strand |
---|---|---|---|---|---|
Csp09G008680.1 | DNA2/NAM7 HELICASE FAMILY | Chr09 | 21588047 | 21621067 | + |
CDS | |||||
Csp09G008680.1 | |||||
Transcript |
Csp09G008680.1 |
Protein |
Csp09G008680.1 |
Gene family | Subfamily |
---|---|
Transcription Factors Family | zf-CCCH |
Pfam accession | Pfam name | Description | Type | Source |
---|---|---|---|---|
PF00642 | zf-CCCH | Zinc finger C-x8-C-x5-C-x3-H type (and similar) | Family | Interproscan |
PF13086 | AAA_11 | AAA domain | Domain | Interproscan |
PF13087 | AAA_12 | AAA domain | Domain | Interproscan |
InterPro term | Type | Description | Source |
---|---|---|---|
IPR000571 | Domain | Zinc finger, CCCH-type | Interproscan |
IPR027417 | Homologous_superfamily | P-loop containing nucleoside triphosphate hydrolase | Interproscan |
IPR036855 | Homologous_superfamily | Zinc finger, CCCH-type superfamily | Interproscan |
IPR041677 | Domain | DNA2/NAM7 helicase, helicase domain | Interproscan |
IPR041679 | Domain | DNA2/NAM7 helicase-like, C-terminal | Interproscan |
IPR045055 | Family | DNA2/NAM7-like helicase | Interproscan |
IPR047187 | Domain | Upf1-like, C-terminal helicase domain | Interproscan |
IPR049569 | Domain | Helicase with zinc finger, DEAD-box 1 | Interproscan |
PANTHER term | Description | Source |
---|---|---|
PTHR10887 | DNA2/NAM7 HELICASE FAMILY | Interproscan |
GO terms | Category | Description | Source |
---|---|---|---|
GO:0004386 | Molecular Function | helicase activity | Interproscan |
GO:0005829 | Cellular Component | cytosol | Interproscan |
GO:0035194 | Biological Process | regulatory ncRNA-mediated post-transcriptional gene silencing | Interproscan |
GO:0043186 | Cellular Component | P granule | Interproscan |
GO:0046872 | Molecular Function | metal ion binding | Interproscan |
KO | Enzyme | Enzyme ID | pathway | mapID | Source |
---|---|---|---|---|---|
- | - | - | - | - | - |