| Gene ID | Annotation | Chromosome | Start | End | Strand |
|---|---|---|---|---|---|
| Csp08G004460.1 | HISTONE-LYSINE-N-METHYLTRANSFERASE 2 KMT2 FAMILY MEMBER | Chr08 | 16882825 | 16907615 | + |
| CDS | |||||
| Csp08G004460.1 | |||||
| Transcript |
| Csp08G004460.1 |
| Protein |
| Csp08G004460.1 |
| Gene family | Subfamily |
|---|---|
| Ubiquitin Family | E3|E3 activity RING|PHD |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00628 | PHD | PHD-finger | Domain | Interproscan |
| PF00856 | SET | SET domain | Family | Interproscan |
| PF02008 | zf-CXXC | CXXC zinc finger domain | Domain | Interproscan |
| PF05964 | FYRN | F/Y-rich N-terminus | Family | Interproscan |
| PF05965 | FYRC | F/Y rich C-terminus | Family | Interproscan |
| PF13771 | zf-HC5HC2H | PHD-like zinc-binding domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR001214 | Domain | SET domain | Interproscan |
| IPR001965 | Domain | Zinc finger, PHD-type | Interproscan |
| IPR002857 | Domain | Zinc finger, CXXC-type | Interproscan |
| IPR003616 | Domain | Post-SET domain | Interproscan |
| IPR003888 | Conserved_site | FY-rich, N-terminal | Interproscan |
| IPR003889 | Conserved_site | FY-rich, C-terminal | Interproscan |
| IPR011011 | Homologous_superfamily | Zinc finger, FYVE/PHD-type | Interproscan |
| IPR013083 | Homologous_superfamily | Zinc finger, RING/FYVE/PHD-type | Interproscan |
| IPR019787 | Domain | Zinc finger, PHD-finger | Interproscan |
| IPR034732 | Domain | Extended PHD (ePHD) domain | Interproscan |
| IPR036427 | Homologous_superfamily | Bromodomain-like superfamily | Interproscan |
| IPR046341 | Homologous_superfamily | SET domain superfamily | Interproscan |
| IPR047219 | Domain | Histone-lysine N-methyltransferase 2A/2B, SET domain | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR45838 | HISTONE-LYSINE-N-METHYLTRANSFERASE 2 KMT2 FAMILY MEMBER | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0003677 | Molecular Function | DNA binding | Interproscan |
| GO:0005515 | Molecular Function | protein binding | Interproscan |
| GO:0005634 | Cellular Component | nucleus | Interproscan |
| GO:0008270 | Molecular Function | zinc ion binding | Interproscan |
| GO:0035097 | Cellular Component | histone methyltransferase complex | Interproscan |
| GO:0042800 | Molecular Function | histone H3K4 methyltransferase activity | Interproscan |
| GO:0045893 | Biological Process | positive regulation of DNA-templated transcription | Interproscan |
| GO:0051568 | Biological Process | obsolete histone H3-K4 methylation | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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