| Gene ID | Annotation | Chromosome | Start | End | Strand |
|---|---|---|---|---|---|
| Csp07G010200.1 | AF4/FMR2 FAMILY MEMBER | Chr07 | 31019797 | 31126593 | - |
| CDS | |||||
| Csp07G010200.1 | |||||
| Transcript |
| Csp07G010200.1 |
| Protein |
| Csp07G010200.1 |
| Gene family | Subfamily |
|---|---|
| Transcription Factors Family | AF-4 |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF05110 | AF-4 | AF-4 proto-oncoprotein N-terminal region | Family | Interproscan |
| PF18875 | AF4_int | AF4 interaction motif | Motif | Interproscan |
| PF18876 | AFF4_CHD | AFF4, C-terminal homology domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR007797 | Family | AF4/FMR2 family | Interproscan |
| IPR043639 | Conserved_site | AF4 interaction motif | Interproscan |
| IPR043640 | Domain | AF4/FMR2, C-terminal homology domain | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR10528 | AF4/FMR2 FAMILY MEMBER | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0002151 | Molecular Function | G-quadruplex RNA binding | Interproscan |
| GO:0005634 | Cellular Component | nucleus | Interproscan |
| GO:0010468 | Biological Process | regulation of gene expression | Interproscan |
| GO:0016607 | Cellular Component | nuclear speck | Interproscan |
| GO:0043484 | Biological Process | regulation of RNA splicing | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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