Gene detail

Detailed information of Csp07G001660.1 in Chaunax sp. Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
Csp07G001660.1	AMINO ACID TRANSPORTER	Chr07	9985817	10017453	+

Gene Structure

More details in Jbrowse Sequence

CDS

Transcript

Csp07G001660.1

ATTCAATCGGTGCAGTGCTTCCGCGCCGTAACCTCACACGATACTGATATGAAAATAAGTCATCAGCGATTTTAAAGGCAGTCAGAGAGCCGGAGAGGAGAGACGACACACGGTTTCACCGAGTTGTCAATGCAAGGCTCCCTGATCTCCCAGCATTAGGATCTGCAAGGCTGGGAGAGACGACGCCCAGTCGTGCACTAAGCCGCCTGACGTAGCATGATGTCCTCCAGCGATCTAGACCTCCCAGGTGATGGTTCTTTGTTCACTGACCAACATCCATCAGAAATGGAcgctctctgtcctcctcctccaggaccTTCCAGACCACAACGACACTATGAGAGGATTGGAGAACGGACAGGAACCTCCTTCTGTCAGACTCTCATCCACCTGTTGAAGGGGAACATCGGTACAGGTCTGCTGGGTCTGCCTCTGGCTGTGAAGAATGCAGGCCTGGTGGTGGGGCCCATCAGCCTGCTGTGTATGGGGGTGATTGCCATCCACTGTATGAGGCTGCTGGTCCGATGCTCCCACCACCTCTCTGCAAAGATGGACCGGCCGTCTATGACCTATGGCGAGGCTGTGCAATATGGGATGGAAAACGTTTCCTGGCTGAGGAGACACGCCCACTGGGGAAAacagATTGTGAACTTGTTCCTCATCATCACCCAGCTGGGCTTCTGCTGCGTCTACTTTGTCTTCCTCAGTGACAACATTAAGCAGGTGGTCGAAGCTGCCAACGCCACCACCTCCAGCTGCCAGACCAACTACACCAACCAGACCGACGTTCTGGTGCAGAGCTTCGACTCGCGCCTCTACATGCTCTGCTTCCTGCCTGCCTTCATCCTGCTCGTCTTCACCCCCAACCTGAAGTACCTGGCTCCCCTTTCTCTGGTGGCAAACCTGGTCATGAGTGCCAGCCTGGTCCTCATCTACATCTACTCAGTCATGAACATCACGTACCCCATCGACCTACCAAAGGTGGGCAGGGCCAAAGACTACCCTCTGTTTTTTGGGACGGCCATCTTTGCCTTTGAAGGGATCGGAGTGGTTCTTCCCCTGGAGAACAAGATGCAGCGGCCCCAGAGCTTCATCGTGGTTCTCTATATGGGGATGGGCATCGTCACCTTCCTCTACATCAGCCTCGGCACCATCGGATACATGTGCTTCGGAGAACAGATCGGTGGGAGCATCACTCTCAACCTGCCAAACTGCTGGACGTACCAGGCCGTGAAGCTGCTCTACTGTTTTGGGATTTTCATCACCTTCGCCCTGCAGTTCTACGTCCCAGCAGAGATCCTCATCCCACCAGTCGTGGCTCGTGTGGCAGAGAGGTGGAAGACCACCATCGACCTGCTGCTCCGCGCATTCTTGGTCATCTTCACATGTGCCCTCGCCGTCCTGATACCAGAGCTGGACCTGGTCATCTCATTGGTCGGTTCAGTCAGCAGCAGTTTCCTGGCGCTGATCTTCCCTCCCATCCTCCAGATCATGACCTTTCATAGAGAGGGCGTGTCGCCGCTGGTGACCATCAAGAACATCTTCATCAGCCTCATTGGGTTTGTGGGCTTCCTCACGGGAACCTACGTCGCCGTCGAGCATATCATCGCCCGGAATGCCCTCAAGTACAAAGAGACGTCCTACATGTTCCAGTGATGACCAGAATGACTGTTGGCCGGAGGCCGTGATGCACCGCTGCCATTTTACAgcatttcagtttgtttttattttcttctcctttGATTTGCTGCCGTCGGATACGGACTCCTCCTCACTACAGCGTCCTGACACACGACTTCGGCAGAGTGTAGGGCcacatttaggaaaaaaaaagagatttagaGAGAAGAAGTCAGAggattatgagaataaagttgtaatttgagagaaaaaagagaaaaatgagaaaaaagtgATGCAAAGCCTTTGTTCTCGTAAAATCACACTtttattctgtatttatttgtgatgTGGCGTTCCACTGTCTTCAGTTTAATTCTAGTTACAGTAGGaactaaactaaataaattaatCTGTTGTCATTTTCAGTCAGAAACATCAAACTACCTCAGACTGGATCGATTTGGCCTTCTGAAGGGCGTGGCTTCTCGTTTAGATGTTAAGGTCGCTTTCGCACCTGAGCTGTCTGGTCCGCTTTGACCGAACCCTGGTTCGTTTCCTCGGATAGTTCGGTACATTAGGGTTGGTGTGAAAGGTCTGGTCTGCTTGAAAACGGGCGTCTCGGGTCGCTTGCTGGTGAACCCTGGTGCGGTTCGTTTGTGGTGTAAAAGCAAAGTGGACCAAGTTATAAACCAAAGGTAGGAAGTGGAGCAAAGCACAGTGCATCGTGGGTAAAAGgaggcaaaacaaacagcatgcaTGTGGAAAACATGGACTACAGGTGTGGAAAAAATGTCAGTTGCTTGTAGCcactcacaaaaacaacaaggTGCTTAAACTATTTAGCAAGAGAACGGAGGCGTTGGGATTCAATCATACAGCTGATCAATGTCGCATTAAGGTAAAAAAACTTCAACAACAATACATTAAATCTTCTAAATAGAAGACATATGAgcgcttttcttcttctttggtgttcATTGGTTCATGAGCATCACAGACGACTTACGACCGCGTGACGTTCAGAAGGTTTGTGTGAAAGCGAACCAATGTTGCATCCGAGTCCCAGGTGAGAACGATCTTAGGGTTCGACCACACAACATGTTTTTGTTGCACTTTAATTTATGCCTTATTCAGCGAAGCAGCGCGTTACTTTATCAACACGTCATATAACTAACAGAAGTTacagaataaatgtttttagGACTCCTGACAGGAAACAGGGCGTGGCATCAGACGGGTCAGATTAATGGAATCTTTGGGAacttttaatccagctgtgttcTTTAAAAGTCAAGAATAATGTTTTTCTCCATAGTTTTATAGATATTGTTCAAATAATTTTTTTGGCCACAATAACCATGTGCTGAAAATCAGATATGAGTTTAATCAATGCAGACGATCAGTTTCTGCCGTCTCTAATCGTGATGCCTAAAAATCTGTCAAAGCTCCAGAATCTGGCTCAAATCAAACTTTATCAAAATGAACATAGAAGCAGACATTTAACATGTTCATGACACtataaataacatttatattttactgTATGTTGGCTTTAAAAGTGATTTAAACCAACATGATTTGGTTCCGATTGATGAGCACGATGTGAAACAATCAAGTCGATCCGATTCTCAAACCGTTCTCTTCTGTTCTTCTCTGGTCTGtaaatttgttttttcatcttttaaatgtatttttatgttttactgtATTTGCTAAATGAACAGTTTGACCATGTTTTTTATGCATCATCACTACTAACCTTGTAAATGTTGTGGATGAATCACTGGCTCCCTgtttgtaatataatgtaaaatgTATGTAAGATAAAACGGCAGGTTTATTAGACATGATCAAATAAAGGTAGTGAGCAGAAACATCCGACACCTGTCACGTTCATGTCGCAGTAcaaacactttttatttttgatctCAAGAAATGGTTATcagaaaatcatcatcatcagtgtgaAGATTTAGAATCACAGCTAAAGATGTTTCCTGTAAATAATCACTTACCTAATCATTCAGTGATTCTGTCCTCAGATGAGATTCTCTCTGGACACTTTAAGAGaaggatgatgatggtgatgatgaagatggcgA

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01490	Aa_trans	Transmembrane amino acid transporter protein	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR013057	Domain	Amino acid transporter, transmembrane domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR22950	AMINO ACID TRANSPORTER	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003333	Biological Process	amino acid transmembrane transport	Interproscan
GO:0005280	Molecular Function	amino acid:proton symporter activity	Interproscan
GO:0015179	Molecular Function	L-amino acid transmembrane transporter activity	Interproscan
GO:0015180	Molecular Function	L-alanine transmembrane transporter activity	Interproscan
GO:0015187	Molecular Function	glycine transmembrane transporter activity	Interproscan
GO:0015193	Molecular Function	L-proline transmembrane transporter activity	Interproscan
GO:0015808	Biological Process	L-alanine transport	Interproscan
GO:0015816	Biological Process	glycine transport	Interproscan
GO:0035524	Biological Process	proline transmembrane transport	Interproscan
GO:1902600	Biological Process	proton transmembrane transport	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-