| Gene ID | Annotation | Chromosome | Start | End | Strand |
|---|---|---|---|---|---|
| Csp05G008860.1 | BLUE CHEESE | Chr05 | 20943558 | 21024390 | + |
| CDS | |||||
| Csp05G008860.1 | |||||
| Transcript |
| Csp05G008860.1 |
| Protein |
| Csp05G008860.1 |
| Gene family | Subfamily |
|---|---|
| Ubiquitin Family | UBD|Other|Beta-prp |
| Ubiquitin Family | E3|E3 adaptor Cullin RING|DWD |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00400 | WD40 | WD domain, G-beta repeat | Repeat | Interproscan |
| PF01363 | FYVE | FYVE zinc finger | Domain | Interproscan |
| PF02138 | Beach | Beige/BEACH domain | Family | Interproscan |
| PF14844 | PH_BEACH | PH domain associated with Beige/BEACH | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR000306 | Domain | FYVE zinc finger | Interproscan |
| IPR000409 | Domain | BEACH domain | Interproscan |
| IPR001680 | Repeat | WD40 repeat | Interproscan |
| IPR011011 | Homologous_superfamily | Zinc finger, FYVE/PHD-type | Interproscan |
| IPR011989 | Homologous_superfamily | Armadillo-like helical | Interproscan |
| IPR011993 | Homologous_superfamily | PH-like domain superfamily | Interproscan |
| IPR013083 | Homologous_superfamily | Zinc finger, RING/FYVE/PHD-type | Interproscan |
| IPR013320 | Homologous_superfamily | Concanavalin A-like lectin/glucanase domain superfamily | Interproscan |
| IPR015943 | Homologous_superfamily | WD40/YVTN repeat-like-containing domain superfamily | Interproscan |
| IPR016024 | Homologous_superfamily | Armadillo-type fold | Interproscan |
| IPR017455 | Domain | Zinc finger, FYVE-related | Interproscan |
| IPR019775 | Conserved_site | WD40 repeat, conserved site | Interproscan |
| IPR023362 | Domain | PH-BEACH domain | Interproscan |
| IPR036322 | Homologous_superfamily | WD40-repeat-containing domain superfamily | Interproscan |
| IPR036372 | Homologous_superfamily | BEACH domain superfamily | Interproscan |
| IPR051944 | Family | BEACH domain-containing protein | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR46108 | BLUE CHEESE | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0005515 | Molecular Function | protein binding | Interproscan |
| GO:0035973 | Biological Process | aggrephagy | Interproscan |
| GO:0046872 | Molecular Function | metal ion binding | Interproscan |
| GO:0097635 | Cellular Component | obsolete extrinsic component of autophagosome membrane | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
© 2024 All Rights Reserved.
