| Gene ID | Annotation | Chromosome | Start | End | Strand |
|---|---|---|---|---|---|
| Csp05G007980.1 | PEPTIDYL-PROLYL CIS-TRANS ISOMERASE-RELATED | Chr05 | 18499363 | 18509935 | + |
| CDS | |||||
| Csp05G007980.1 | |||||
| Transcript |
| Csp05G007980.1 |
| Protein |
| Csp05G007980.1 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00160 | Pro_isomerase | Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD | Domain | Interproscan |
| PF12534 | Pannexin_like | Pannexin-like TM region of LRRC8 | Family | Interproscan |
| PF13855 | LRR_8 | Leucine rich repeat | Repeat | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR001611 | Repeat | Leucine-rich repeat | Interproscan |
| IPR002130 | Domain | Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain | Interproscan |
| IPR003591 | Repeat | Leucine-rich repeat, typical subtype | Interproscan |
| IPR020892 | Conserved_site | Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site | Interproscan |
| IPR021040 | Domain | LRRC8, pannexin-like TM region | Interproscan |
| IPR029000 | Homologous_superfamily | Cyclophilin-like domain superfamily | Interproscan |
| IPR032675 | Homologous_superfamily | Leucine-rich repeat domain superfamily | Interproscan |
| IPR044666 | Family | Cyclophilin-type peptidyl-prolyl cis-trans isomerase, cyclophilin A-like | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR45625 | PEPTIDYL-PROLYL CIS-TRANS ISOMERASE-RELATED | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0000413 | Biological Process | protein peptidyl-prolyl isomerization | Interproscan |
| GO:0003755 | Molecular Function | peptidyl-prolyl cis-trans isomerase activity | Interproscan |
| GO:0005515 | Molecular Function | protein binding | Interproscan |
| GO:0006457 | Biological Process | protein folding | Interproscan |
| GO:0071013 | Cellular Component | catalytic step 2 spliceosome | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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