Detailed information of Csp04G003080.1 in Chaunax sp. Gene info
Gene IDAnnotationChromosomeStartEndStrand
Csp04G003080.1MYOGENIC FACTORChr0478504227852845-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
Transcription Factors FamilybHLH

Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00010HLHHelix-loop-helix DNA-binding domainDomainInterproscan
PF01586BasicMyogenic Basic domainFamilyInterproscan
PF12232Myf5Myogenic determination factor 5FamilyInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR002546DomainMyogenic muscle-specific protein, N-terminalInterproscan
IPR011598DomainMyc-type, basic helix-loop-helix (bHLH) domainInterproscan
IPR022032DomainMyogenic determination factor 5Interproscan
IPR036638Homologous_superfamilyHelix-loop-helix DNA-binding domain superfamilyInterproscan
IPR039704FamilyMyogenic factorInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR11534MYOGENIC FACTORInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0000978Molecular FunctionRNA polymerase II cis-regulatory region sequence-specific DNA bindingInterproscan
GO:0000981Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specificInterproscan
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0007517Biological Processmuscle organ developmentInterproscan
GO:0035914Biological Processskeletal muscle cell differentiationInterproscan
GO:0045663Biological Processpositive regulation of myoblast differentiationInterproscan
GO:0046983Molecular Functionprotein dimerization activityInterproscan
GO:0048743Biological Processpositive regulation of skeletal muscle fiber developmentInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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