Gene detail

Detailed information of Csp04G000860.1 in Chaunax sp. Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
Csp04G000860.1	NEUROPEPTIDE RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR	Chr04	1790780	1793415	+

Gene Structure

More details in Jbrowse Sequence

CDS

Transcript

Csp04G000860.1

ATGCACACTCCTGACTATGCGCTGCTCCTGAGCGGAGGGAACCAGTCTCTGGTGTCCGGGCCCACCGATGACTTCATGATGGGAACGCATGGAAACAACACCATCCACCCGAACGGATCTGATCCCTTCGCGCGAAACGAGCAGGTAGCCCAGATCGAGATAATGGTGCTGAGCATCACCTTCGTGGTTGCTGTGATCGGGAACGTGAGCGTCCTGCTGGCGATGTACAACACGAAGAAGAAGATGTCACGGATGCACCTTTTCATCAAACACCTGAGCCTGGCTGACCTGGTGGTCGCCTTCTTCCAGGTGCTGCCGCAGCTCTGCTGGGATATCACCTTCCGTTTCTACGGCCCAGACTTTCTCTGCAGGATCGTCAAACACCTCCAGGTGATGGGGATGTTTGCGTCCACATacatgatggtgatgatgactCTGGACCGTTACATCGCCATCTGCCACCCCCTGAAAACGCTCCAGCAGCCCACCCAGCGCTCCTACATCATGATCATCTCCACGTGGGTGTGCAGCCTGGTGGTCAGCACCCCGCAGTACTTCATCTTCTCCCTCAGCGAGATCAAGAACGGCTCGGACATTCGCGACTGCTGGGCGCACTTCATCGAGCCATGGGGCGCCAAGGCGTACATCACCTGGATAACCGTTGGCATCTTCCTCGTGCCTGTGGTCATTCTCATGATGTGCTACGGGTTCATCTGCCACACCATTTGGAAAAACATCAAATTCAAGAAAAGGAAAACGGTGGCTGGTGCTGTGAGCAAAAACGGACTAATTGGGAAGAATTCCGTCAGCAGCGTTACAACAATATCAAGAGCTAAACTGAGGACGGTGAAAATGACGTTTGTGATCGTTTTGGCGTACATCGTGTGTTGGGCGCCGTTTTTCACGGTCCAGATGTGGTCTGTGTGGGATGAAAACTTCCAGTGGGCTGATTCTGAGAACGCAGCTGTGACTCTATCTGCGCTCCTTGCCAGTCTCAACAGCTGCTGCAACCCGTGGATTTACATGATCTTCAGCGGTCACCTCCTCCAGGATTTCATGCACTGCTTCTCATGTGTCAAAGTGAACACTGACTACAAGAAGGAAGACTCTGACACCAGCCTCCGCAGAACGACGTTGCTGACCAAGATAACTAATCGGAGCCCCACCAGTAGTTCTGGCAACTGGAGGGAGCTGGAAAATTCTCCCAAGACCTCCATTCAGGTGGAGTAAACATGCAGCCAGGCAACTCTGTTTACTGGGGTGGGAATTTGAAAATTGTCTGGAAGTGGCATCAAGGTACAGCTCATCTTAACTTTGGGCATGACTGACGTTGATTGAAATGTCCTCCAAACCCACCAAAATAAAGCTTTAGTTTGGAAAACGGGGAACAAAGTGAAGGAACATAATTTGCCACAAGGACATGAAATATGGACACATGCAGGATATTGTGTGCAAACATGTTCCTCACACCTGCAGCAAAAATACTAGAAAAACACTGCAAACAttataatgtttttatatcTCCAAAATTCTTTGTAAAAGAATTTGATGCTAATCGTTGTACTATAGTCAAGCAGGTTTCTTTGGAGTCCCAACATGATTCTGTTTAGCGCTGCAGAGCCGCCAAACTCCCTTTCCTGTTAGAGTGTTTACAGAGATAAAACGTACATAATAGCCAGGAGGATGTGCGACGGTGAAAACAACTTTTGCAGACCACATGTCTCTAAGTAACCGAAGCCGTCGCCTCATCCTTTGTGCTCAGCTTCTTCTCAGAACCAGGTTTTAGTGGCTTCAGTAAGAAAAGAAGCCTTTGAccaagaaagaagaaagaattaTATGGACTGCCTTTGTGTTGGAGATCACaattagatagatagagatggatagataaatacCATGAGACCATGTTTGTTGTACTGTATCAAGACATTTCAGTCCAGATGTGTATATTTGTACATAAAAGGCACCTGAATATCTGTAAATAGGAg

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00001	7tm_1	7 transmembrane receptor (rhodopsin family)	Family	Interproscan
PF08983	V1R_C	Vasopressin V1 receptor, C-terminal	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000276	Family	G protein-coupled receptor, rhodopsin-like	Interproscan
IPR001224	Family	Vasopressin V1A receptor	Interproscan
IPR001817	Family	Vasopressin receptor	Interproscan
IPR015076	Domain	Vasopressin V1 receptor, C-terminal	Interproscan
IPR017452	Domain	GPCR, rhodopsin-like, 7TM	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24241	NEUROPEPTIDE RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0001992	Biological Process	regulation of systemic arterial blood pressure by vasopressin	Interproscan
GO:0004930	Molecular Function	G protein-coupled receptor activity	Interproscan
GO:0005000	Molecular Function	vasopressin receptor activity	Interproscan
GO:0005887	Cellular Component	plasma membrane	Interproscan
GO:0007186	Biological Process	G protein-coupled receptor signaling pathway	Interproscan
GO:0016020	Cellular Component	membrane	Interproscan
GO:0032870	Biological Process	cellular response to hormone stimulus	Interproscan
GO:0042277	Molecular Function	peptide binding	Interproscan
GO:0045907	Biological Process	positive regulation of vasoconstriction	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-