Gene detail

Detailed information of Csp03G008180.1 in Chaunax sp. Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
Csp03G008180.1	HEMK METHYLTRANSFERASE	Chr03	19907254	19915537	+

Gene Structure

More details in Jbrowse Sequence

CDS

Transcript

Csp03G008180.1

CCACTTTTGGAGGGGTTTCCGGTTGCCCCAcggtaaacattttatttattcgaCAGTAATTAAACGCAACATGGCTCAACAGCGTCAGTGCTGCGTATGTCTACCGCACATGAAAATGTTCTGCGTCAGGTCGGAGAGGTATGCAGCGCCATGTGTAGGAAATCTAGCGCGCCATCCGAATGCAGAAATGGTGTTTAATGTCTGTATAGAACGATACCAGTGACTGTAAGGATGTAGCGAGTACCGCTGTCTTCACTAACTGTATGTGaggatgtatgtatgtgcagAGAAGGTGCGTTCAAATCAGTCATGTGGAGAAGATCTCTGAATGCAGCGTTCAGACGCTTTAAGCCAAAGGGGATTTGGGACTCCTATGCAGTGCGTAGATGCAGCATTCCAGCCTTACCCACAAGCAGGatcacagcactgcaggcaGTGGACTTATGGAAGAGGCACTTTGTCCAGACAGGTGTGACGGAGCCTGGCTACTCCATTCACTACATTGTTGCTTATCTGCTGGGGTCTAAAACTATTGAAAGTCTCGAGCAGGGGAAGTTAACTGAGCTTCTCAGCCGAGAAAAAACAGAGCAGATGTGGCAGCTCTGCACTAGACGCCTTTCCAGaaTGCCTGTGCAGTATGTGATTGAGGAGTGGGACTTCAGAGATCTGACACTGAAGATGAGACCTCCTGTGTTTATACCAAGACCTGAAACTGAGGAGTTGGTTGAACTTGTTCTCACTGATCTGGAGAGGAAGCCCAGGACTGCAGAGGATACAGATGCCCAGCATGCATGCATGGAAGTGGGATGTGGCTCTGGTGCCATTTCTCTCAGTCTGCTGAAGAGTCTGCCTCAGTTTAAAGTCTTTGCTGTGGATCAAAGTCTGGATGCAGTGGATTTAACAACAGAGAATGCGTCGAGGTTGGGGCTTCAGGACAGGTTACAGGTTCATCATATAGATGTTATGACAGATGCAGAAACCCTGTTGAGCCTCTGTGGCCCTGTTTCAACATTGGTCAGTAACCCTCCATACCTGTTCTCAGAGGACATGAAGTCACTGGAACCTGAAATTTCCAGGTTTGAGGACCATGCTGCTTTAGATGGAGGTAAAGATGGCCTAAAAGTGATTAAACAGATTTTGGCTCTGGCTCCACAGATTCTTTCAAATCATGGCCGTGTTTACTTGGAAGTAGACCCCATACACCCCCCACTCATTCGACGCTGGGTGGAGGTGAGTGTTGAGGAGCTGCGTTATGTGGAGACGCGACACGACATCACTGGCAGGCCGCGATTCTGCATCCTTCATAAAGAGAAGTCAAGCAAGCACCTCAAGATGGATCTGGATTGAGAAACTGAGATCCTATTACGCTGGCTTCAGCCCAAGTTGCCACAGCCCCAGCTCCCCTACCCCCACTGAGCCACCAAAGCTCACTCACACCGATTGGTCACTTACTATTCACAATTTAGTGAAGTTTAAATCATTGTCAAGtcactgttgtgtttttaatctgGTAAGATTTGTGATCACATCCTGcaccagaataaaaaaaatatatgcatGATGGAACAACAGGGCTCAAAGCTGAAGGTAATTACCGAGGCTTTTCTTAGAACCCTCGCTCTCAGAATCTCACCCTCCTCCCAGGAAGCATTCAGTAGTTCTGTGAAACCACTGATGAACGGTCCTCCCCTTTGCTTGTCTGCTTGCTGACTCAGATGCAGGCTGTATGCATTGttgagcaaaaacacacacagtgtggcCTTTACTTCCTCATATAATCTGCATCTCTCGCACACTTAAAACTCAAAAGCCGCAAAGTCTTTGTGTTTCAAAGGTGACGAAGGCAAATCTAACTTGTAATAAGTGTCACAGGAGCAGCCATCATGTGCTTGTTAATAAGGATGATGGTGACTATTTCTCCATTTACCCTTGTGAGTAATTCTGTCACTTTAAGCAAAATGAGAAAAGAATATAAAGGACAGAGAGTTCAAGTCCAATTGCTtattttaatagaaaaaaaatgtacacatgttaaaggtagaAAAATGTCTTAGTGAGAAGAATAAAAT

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF05175	MTS	Methyltransferase small domain	Domain	Interproscan
PF17827	PrmC_N	PrmC N-terminal domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR002052	Conserved_site	DNA methylase, N-6 adenine-specific, conserved site	Interproscan
IPR004556	Family	Methyltransferase HemK-like	Interproscan
IPR007848	Domain	Methyltransferase small domain	Interproscan
IPR029063	Homologous_superfamily	S-adenosyl-L-methionine-dependent methyltransferase superfamily	Interproscan
IPR040758	Domain	Release factor glutamine methyltransferase, N-terminal domain	Interproscan
IPR050320	Family	Protein N5-glutamine methyltransferase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR18895	HEMK METHYLTRANSFERASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003676	Molecular Function	nucleic acid binding	Interproscan
GO:0005739	Cellular Component	mitochondrion	Interproscan
GO:0006479	Biological Process	protein methylation	Interproscan
GO:0008168	Molecular Function	methyltransferase activity	Interproscan
GO:0008276	Molecular Function	protein methyltransferase activity	Interproscan
GO:0032259	Biological Process	methylation	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-