Gene detail

Detailed information of Csp02G008510.1 in Chaunax sp. Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
Csp02G008510.1	PHOSPHOLIPID ACYLTRANSFERASE	Chr02	29329774	29340619	-

Gene Structure

More details in Jbrowse Sequence

CDS

Transcript

Csp02G008510.1

CTCGAAGCCCCGCAGCGACCGCGTTGGAGGTGGAGCTTGAAAGACGCCAGTCCGGATCTGCTCCCGGCTGCTCGCGTCTGCGCTCGCCCGCATGTGATCGTCTGATATGGGGGAGAAATGAGAGCACAGGGTCCCCGTTGAGGAAGTGATACcataaccaaaaaaaaaaagaagcatttgcCTGCTGTTCTTTCACCGGACTGCCATGCCGCCACAGCGAGTATTCGCCCTGCCGAGGCAACAGTCCCTGCTCCTGCCTGCGGTCATCAACCCCTTTGTTCAAGACACCAAACTAACAACATCCGCTATCATTAAATGCGTCCTGTTGGGAATCGTCCTGGTTCCGATTCGCGCCATCCTTCTGTCCCTAGTTCTCATGGTGACATGGCCAGTGGCGGTCATCATAACCTTCAAGCATCCTCTGAAAGGAGCTGTGGAACCAATGACAGGCTGGAGACGCTTCATGTGTCGGAGAGTGATGGCTGCTTTGGGAAGAGCGTACTACTTTTGCATGGGCTTCAGAGTGGTGGTTAAGGGCAAGCAGGTCAGCAGCAGTGAGGCCCCCATCCTGGCTGTGGCCCCCCACTCCACCTTTTTTGATGGGATTGTGTGCATTGTTGCAGGCTTGCCCTCTACCGTCTCCCGCGTGGAAAACCTGGCTACACCCATCTTTGGCAGGTTTGTGCGCTGTCTTCAGCCAGTGTTGGTGTCCAGAAAAGATCCAGATTCCAGGAAGAACACAATCCAAGCAATTGACAGCAGAGCCAAGTCAGGAGGCCACTGGCCACAGGTTCTGATTTTCCCAGAGGGAACTTGTACAAATCGTTCATGTCTTATTACTTTTAAACAAGGTGCCTTTATCCCAGGGGTTCCTGTGCAACCTGTACTTATGAGATATCCCAACAAACTGgaTACAGTGACTTGGACTTGGCAGGGTTTCAGCTCGAAGACGCTGCTGCTTCTGACACTGTCCCAGCTGTACACCACAGTGGAGATAgagTTCCTGCCACCACATATCCCcacagaagaggagaaaaaaaccccAGCTCTGTTTGCTAGCCGAGTGCGAAAAACTATGGCTAATGCTTTAGGAGTTCCAGTGACCGACCACACATATGAAGACTGCCGCCTGATGATCTCAGCCGGCGAGCTCACGCTGCCGATGGAGGCCGGCCTGGTCGAGTTCACCAAAATTAGTCGGAAACTCAATCTAAAGTGGGACAATCTGAAAAAGGAGCTGGACGGCTTCGCGGCCATGGCCAGCTCTTGTAAAGGAGGACGGATCAGCATTGAGGACTTTGCCAGATTTCTGAAGCTACCTGTCAACACAGCCCTCGAAGAGCTGTTTGCACTGTtcgacagaAACGGAGATGGCACCATAGATTTCAGGGAGTATGTTATCGGCGTGACCATCTTGTGCCGACCAGCGAACACCGAAGACGTTCTCCGACTGGCTTTCCAGCTGTTTGATACAGATGAGGATGAAAGAATCACCCGAGAGGAATTCACCGCTCTGCTGCGCTCGGCTCTGGGGGTGTCAGATCTAAACATGGCCAAGCTCTTCAAGGAAATTGATGCTGACGGCTCTGGTTTCATCACCTTCAGCGAATTTCAAGCCTTTGCCACGACCCACCCGGAATACGCAAAGCTCTTCACTACCTACCTGGAGCTTCAGAGGTACCAAGCAATCCAGGAGGCGAATCCAGGTGATCTGGAATTGGCCGGTCCGACCAGTTCaggggaagaagaggaagagtcCGTCTCTGACAAAAAAGATGACTGATCCTGAGGATGACCGTGAACTCTCCATGAACGCACCGGGCGATAGAACACTGTATTCACTGCACTGAGATGGAAAAAACTCAAAAGCGTTAGCTGACTCCAACGACTTCTAGAAAATTAGAACCATTTGCCGCAGCAGAGCCATTTTTATACGTCATATGTGCTTGCCTTTTATAGGTGGTTTTTAGAAGTGCATCTATTTTCAATTTTAGTGCCTTATAGAGATTTTAAAAGAACCACTTCCCCGAGCCGCTGCACAAGAAATGTCCTCTCTTCATCCCTTCAAGTGTTTTGTGAGTCTTTGTTATGTGTCCATCAGGGAGGATAAACAacgaaaaaaaaatagattaaaagCTTGTCATGggatgaaaatatatatataaaaaaagtgTGTAGTTTTAGAGGTCTAATGTTAGTTACAGTGTTTAATGAtgtatttgaatatattttccAGACCTGCCTCTCATCATCCTCTGTAGCCTGACGTTTACCCTTTGCGAGGGCTTTGATGAACATACTTTAGTGTACAGTACTTTCTCCTTTGTCTTTGTGGTTGTCTAAAagtgagtggaaaaaaaatgccAAACCAACACCTTTTTAAATATAAGCAGAGTCCTTGTGCTTTTGTGTTGCAGTGTAATTAGTACAGTGCGGTACAGAGAGCTTTATTCAGATCCTTCCAAATTAAACCACAGATGTCCCGTATTAAAGCTGTATCTACGAAGAGCATACATGCTGTGCATTACACTTGCTTTCCAGCGCTCAGGGACACAGACCTTGTAAGACAGCTGTATAATTAGCCAGTGGTTTGCTTTGCATGTGTATCCATTTGCATTTCTACTGAAGATTGTTGTTGCTGAGACAGCAGCATGTCTGCACAGCTTTAAGTTTACTAAAGCAAATCAGCCACTGAAAATAGGGCAATTTGTGAGCATAAAGGCAATAGTGTCTCTGTTCACAACTGTGTATTCCAGTGGGGTATGCTTTCAGATTAACTAGCAGCACTGTTGTTTATTTAGCAAGGTGCATTGCAATTATgtgattttttgtgtgtttttttcatttttgttaacACTGCaaagtttgctttttaaaataaacaaataatgtaattctaa

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00036	EF-hand_1	EF hand	Domain	Interproscan
PF01553	Acyltransferase	Acyltransferase	Family	Interproscan
PF13499	EF-hand_7	EF-hand domain pair	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR002048	Domain	EF-hand domain	Interproscan
IPR002123	Domain	Phospholipid/glycerol acyltransferase	Interproscan
IPR011992	Homologous_superfamily	EF-hand domain pair	Interproscan
IPR018247	Binding_site	EF-Hand 1, calcium-binding site	Interproscan
IPR045252	Domain	Lysophosphatidylcholine acyltransferase LPCAT1-like	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR23063	PHOSPHOLIPID ACYLTRANSFERASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005509	Molecular Function	calcium ion binding	Interproscan
GO:0005783	Cellular Component	endoplasmic reticulum	Interproscan
GO:0008374	Molecular Function	O-acyltransferase activity	Interproscan
GO:0016746	Molecular Function	acyltransferase activity	Interproscan
GO:0042171	Molecular Function	lysophosphatidic acid acyltransferase activity	Interproscan
GO:0047184	Molecular Function	1-acylglycerophosphocholine O-acyltransferase activity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-