Gene detail

Detailed information of Csp01G004590.1 in Chaunax sp. Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
Csp01G004590.1	BILE ACID BETA-GLUCOSIDASE-RELATED	Chr01	17783739	17795451	-

Gene Structure

More details in Jbrowse Sequence

CDS

Csp01G004590.1

ATGAGCACAGAGTGGGGTGAGAAATCCACAGCGGACCTCATGAGCAGATATGTGTCCAAGGAAATGGGATATGGAGTTCCACAGGAGGGTTGGCGAATCTGCCTGGCACATGAGTTCAAGGAGAAGAGGAAGCCCTTTCAAGCAAAAGATGTCTCGCTGTCCAATGTGTTGGAGCACATGGGCCTAGGAATCAGGTATCTAAAGTGGTGGTACAAGAAGACCAAGGTGGAAAAGAAGGCTCCATTCATCGATATGTTTAGTGCACTACCTTTGAATCAAATATATGGCGCTCCACTCGGCGGCATTGGAGGAGGCACCATCACAAGAGGTTGGAGGGGGGAATTCTGCAGATGGCAGCTTAACCCTGGGATGTACCACTACAAAACCGTCATAGCAAACCAGTTCACAGTGTGTTTGCATCGTAAGGGACAAACGGTTTACCAGCAAGTCTTATCCGTAGAGCGTCCTCCCACGTTACAAGGCTGGAACTGGGGCTACTGCGGAGAGTATGCCTTCTATCACGCCCTGTACCCCCGCGCCTGGACCGTCTACCACCTGCCGGGACAGAATGTCACACTAACCTGCAGACAGATTTCTCCAGTCATTCCTCACAACTACCAGGACTCCAGTCTCCCAGTGGCAGTGTTCGTGTGGGACATAGAGAACAAGAATGACTACGCTCTGGACGTCTCCATCATGTTCACGATGGTGAACGGCTCGGGTCAGAAGGGAGACAAGAGCGGGGGACACTGGAATGAACCGTTCCACCTGGAGAAGGAGGGGGAGGCAGTGTCTGGGGTCTTGCTGCATCACTGCGCTGCGGTGAACCCTTACACTCTGAGCATCGCAGCGCGAGCACAGTCTGACAGGGAGGTCAGTCACCAGACAGCATTCAATCCAAAGGGAACCTGCAGCGGCCTGTGGAGAGACCTCATCAATGACGGACGACTGGACTCTCCTACAGGATCCAGCCCGCCGACACCTACGGGAGAGAAGGTGGCAGCAGCGTTGGCTGTGGGCTGCTCAGTGCCGGCTCAGAGCCAGAACGCCCTGGAGTTCTGCCTGGCCTGGGACATGCCCAAAATCACCTTCGGCTCGAGGGAGAGGGAACACACCAGGAGATACACTCGTTACTTTGGGACCAAAGGCGACGCGGCCCCCTCGCTCTGTCACTACGCCCTAACGCACTACAGACAGTGGGAGAAAAGCATTGAGGAGTGGCAAAGGCCCGTCCTACAGGACAGTTCTCTCCCCTCCTGGTACAAGTCGGCCCTGTTTAACGAGCTGTACTTTGTGGTGGATGGAGGGACGGTGTGGACAGAGCTGCCGGAGGACGCTGATGTCAGCGGCGGCATGCGCAGCGAGGACGGAGGCCTCCCGGCTCAGCCCGCCGTCGTCAAGGAGTACGGACGGTTTGCCTACCTAGAAGGTCAGGAGTACAGAATGTACAACACATACGATGTGCACTTCTACGCTTCCTTTGCACTTATCATGCTGTGGCCCAAACTCGCCTTGAGTGTGCAATATGATATAGCCGGCAGTGTGGTTCAGCAGGACCCGACAGAGAGGCTCCATCTGAAGAATGGACGGTATGCTCCTGTCAAGACCAAAAATGTGGTTCCTCACGACATTGGAGACCCAGATGATGAGCCATGGTTGAGGGTGAATGCCTACCTCATCCACGACACAGCGGACTGGAAGGACCTGAACCTGAAGTTTGTCCTGCAGGTCTACAGGGACTTCCATCTCACCCAGGACAGTCAGTACCTACGGGACTTGTGGCCCATCTGCCAGGCGGTGATGGAGTCGGAGATGAAGTTCGACCTGGATGGAGATGGACTGATAGAGAACTCTGGATACGCTGACCAGACCTACGATGGTTGGACAGTGACTGGACCAAGTGCATACTGTGGCGGTCTGTGGTTGGCATCCCTGTGTGTGATGTGTAAGATGGCTAAGCTCGTGGACAGCGAGGAGACATACCAGCGTTACACAGAGATTTTGAACAGGGGCAGCGCTGCGTTTGACAAACTGCTGTGGAACGGGAAGTACTACAACTATGACAGCAGCGGAAGACGGTTTTCCAATAGCATCATGTCTGACCAGTGTGCCGGCCACTGGTTCCTGAGAGCGTCCGGGCTGGGAGAGGGAGAATTCCAGGCTTTTCCAAATGAAAAAATCAAAAGCGCACTAAAGTGGGTCTTCGACTTGAACGTCATGAGCTTCGCCGGAGGCCAGATGGGGGCAGTGAACGGCATGCGTCCTGAAGGAGTGCCCGACCGCTCCAGTGTCCAGTCAGATGAGGTCTGGATTGGGGTGGTGTACGGACTGGCAGCCACGATGATCCATGAGGGTATGAGAGAAGAGGGTATGCGCACGGCGGAGGGTTGCTACCGGACCGTGTGGGAAAGGCTGGGCATGGCCTTCCAGACCCCCGAAGCCTACTGTGAAAGGGGCATCTACCGCTCTCTGGCGTACATGAGGCCTCTGAGCATCTGGGCCATGCAGCATGCCCTGAACACCTCGCCGAAGGATCGGACGACGTCAGCTCAACCTGGAACCGCGGACGGGGAGCAGGAGCAGGATGTGAGAGAAAATCCGAACTAG

Transcript

Csp01G004590.1

TGGGCTCAGAGGTCGGTTTGTTGCGGGAGCAAGTTGACGCGATCTCTCTGGAACTTAAAAAATCTACTCTGTCCTGCTGGTTATGGTGTCCTGGTGGAATGACTGATATTGGCAATCTCTATAATTTGTTGGTCTTAATCTGCCATCCACCCGACCTCAGCTGCACAGACACATCGAGACTCCAATGCTAATGGGGTCTAAAACGGTCTGATACCGAGAAGCAAATCACTGCAGTCCACAAGGATATGACTATATTGGAGTGGACAGTAATCTTGTAATAGTCCTGGGATCTCTTGTCTGAAAGAGGAATTTCTTATCCATTGTTCCAGCTTCCTATTGCTGGGTGGCCTGCAAAAATGAGCACAGAGTGGGGTGAGAAATCCACAGCGGACCTCATGAGCAGATATGTGTCCAAGGAAATGGGATATGGAGTTCCACAGGAGGGTTGGCGAATCTGCCTGGCACATGAGTTCAAGGAGAAGAGGAAGCCCTTTCAAGCAAAAGATGTCTCGCTGTCCAATGTGTTGGAGCACATGGGCCTAGGAATCAGGTATCTAAAGTGGTGGTACAAGAAGACCAAGGTGGAAAAGAAGGCTCCATTCATCGATATGTTTAGTGCACTACCTTTGAATCAAATAtatgGCGCTCCACTCGGCGGCATTGGAGGAGGCACCATCACAAGAGGTTGGAGGGGGGAATTCTGCAGATGGCAGCTTAACCCTGGGATGTACCACTACAAAACCGTCATAGCAAACCAGTTCACAGTGTGTTTGCATCGTAAGGGACAAACGGTTTACCAGCAAGTCTTATCCGTAGAGCGTCCTCCCACGTTACAAGGCTGGAACTGGGGCTACTGCGGAGAGTATGCCTTCTATCACGCCCTGTACCCCCGCGCCTGGACCGTCTACCACCTGCCGGGACAGAATGTCACACTAACCTGCAGACAGATTTCTCCAGTCATTCCTCACAACTACCAGGACTCCAGTCTCCCAGTGGCAGTGTTCGTGTGGGACATAGAGAACAAGAATGACTACGCTCTGGACGTCTCCATCATGTTCACGATGGTGAACGGCTCGGGTCAGAAGGGAGACAAGAGCGGGGGACACTGGAATGAACCGTTCCACCTGGAGAAGGAGGGGGAGGCAGTGTCTGGGGTCTTGCTGCATCACTGCGCTGCGGTGAACCCTTACACTCTGAGCATCGCAGCGCGAGCACAGTCTGACAGGGAGGTCAGTCACCAGACAGCATTCAATCCAAAGGGAACCTGCAGCGGCCTGTGGAGAGACCTCATCAATGACGGACGACTGGACTCTCCTACAGGATCCAGCCCGCCGACACCTACGGGAGAGAAGGTGGCAGCAGCGTTGGCTGTGGGCTGCTCAGTGCCGGCTCAGAGCCAGAACGCCCTGGAGTTCTGCCTGGCCTGGGACATGCCCAAAATCACCTTCGGCTCGAGGGAGAGGGAACACACCAGGAGATACACTCGTTACTTTGGGACCAAAGGCGACGCGGCCCCCTCGCTCTGTCACTACGCCCTAACGCACTACAGACAGTGGGAGAAAAGCATTGAGGAGTGGCAAAGGCCCGTCCTACAGGACAGTTCTCTCCCCTCCTGGTACAAGTCGGCCCTGTTTAACGAGCTGTACTTTGTGGTGGATGGAGGGACGGTGTGGACAGAGCTGCCGGAGGACGCTGATGTCAGCGGCGGCATGCGCAGCGAGGACGGAGGCCTCCCGGCTCAGCCCGCCGTCGTCAAGGAGTACGGACGGTTTGCCTACCTAGAAGGTCAGGAGTACAGAATGTACAACACATACGATGTGCACTTCTACGCTTCCTTTGCACTTATCATGCTGTGGCCCAAACTCGCCTTGAGTGTGCAATATGATATAGCCGGCAGTGTGGTTCAGCAGGACCCGACAGAGAGGCTCCATCTGAAGAATGGACGGTATGCTCCTGTCAAGACCAAAAATGTGGTTCCTCACGACATTGGAGACCCAGATGATGAGCCATGGTTGAGGGTGAATGCCTACCTCATCCACGACACAGCGGACTGGAAGGACCTGAACCTGAAGTTTGTCCTGCAGGTCTACAGGGACTTCCATCTCACCCAGGACAGTCAGTACCTACGGGACTTGTGGCCCATCTGCCAGGCGGTGATGGAGTCGGAGATGAAGTTCGACCTGGATGGAGATGGACTGATAGAGAACTCTGGATACGCTGACCAGACCTACGATGGTTGGACAGTGACTGGACCAAGtgCATACTGTGGCGGTCTGTGGTTGGCATCCCTGTGTGTGATGTGTAAGATGGCTAAGCTCGTGGACAGCGAGGAGACATACCAGCGTTACACAGAGATTTTGAACAGGGGCAGCGCTGCGTTTGACAAACTGCTGTGGAACGGGAAGTACTACAACTATGACAGCAGCGGAAGACGGTTTTCCAATAGCATCATGTCTGACCAGTGTGCCGGCCACTGGTTCCTGAGAGCGTCCGGGCTGGGAGAGGGAGAATTCCAGGCTTTTCCAAATGAAAAAATCAAAAGCGCACTAAAGTGGGTCTTCGACTTGAACGTCATGAGCTTCGCCGGAGGCCAGATGGGGGCAGTGAACGGCATGCGTCCTGAAGGAGTGCCCGACCGCTCCAGTGTCCAGTCAGATGAGGTCTGGATTGGGGTGGTGTACGGACTGGCAGCCACGATGATccatgagGGTATGAGAGAAGAGGGTATGCGCACGGCGGAGGGTTGCTACCGGACCGTGTGGGAAAGGCTGGGCATGGCCTTCCAGACCCCCGAAGCCTACTGTGAAAGGGGCATCTACCGCTCTCTGGCGTACATGAGGCCTCTGAGCATCTGGGCCATGCAGCATGCCCTGAACACCTCGCCGAAGGATCGGACGACGTCAGCTCAACCTGGAACCGCGGACGGGGAGCAGGAGCAGGATGTGAGAGAAAATCCGAACTAGGACCCGAGCCGTCGAACCGCCGGCGTGATGGAAGAAGAGTTTCCTGCGTCTGCAGAGCTCCGTTTCATtggtcacagtgtttttgatCTGCTTCAGACGTTTGGTAGTTTGAGGGCTGAAGTCAGAAATGTGATGGTTTACGCTTTAGCTACTGTACTTCATGGAAGTGGGAGGTGAGGACTTTAAAGTTCAAGAGACTGCAGATggttcttgatttttttttttttaaagctgggtGGTGTAGAGTGGAATGGAGGAGGTGGCAAAATCATAGCCAGTATGTTTTAcgaattaaaaatgtgtttgtctatTTGCTCTCATGCAAACATTACGTTTCAGAATCACCTCAATAATGATGTTTGCATATTATATGTGTTATTATACAAGCCACATGATTCAGGACATGTGAATGACTTATTATTCAGACATTTAGACaccacatttttcttcttcctccacttATATTTGAATGTCATTCTAAATGATAAACGTGAtgagatttcttttttgttaaaCAGCATTTGATGCCTTGTTGCATGTTAG

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF04685	DUF608	Glycosyl-hydrolase family 116, catalytic region	Repeat	Interproscan
PF12215	Glyco_hydr_116N	beta-glucosidase 2, glycosyl-hydrolase family 116 N-term	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR006775	Domain	Glycosyl-hydrolase family 116, catalytic region	Interproscan
IPR008928	Homologous_superfamily	Six-hairpin glycosidase superfamily	Interproscan
IPR012341	Homologous_superfamily	Six-hairpin glycosidase-like superfamily	Interproscan
IPR014551	Family	Beta-glucosidase GBA2-type	Interproscan
IPR024462	Domain	Glycosyl-hydrolase family 116, N-terminal	Interproscan
IPR052566	Family	Non-lysosomal glucosylceramidase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12654	BILE ACID BETA-GLUCOSIDASE-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004348	Molecular Function	glucosylceramidase activity	Interproscan
GO:0004553	Molecular Function	hydrolase activity, hydrolyzing O-glycosyl compounds	Interproscan
GO:0005975	Biological Process	carbohydrate metabolic process	Interproscan
GO:0006680	Biological Process	glucosylceramide catabolic process	Interproscan
GO:0007417	Biological Process	central nervous system development	Interproscan
GO:0008422	Molecular Function	beta-glucosidase activity	Interproscan
GO:0016020	Cellular Component	membrane	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-