Gene detail

Detailed information of Csp01G003680.1 in Chaunax sp. Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
Csp01G003680.1	REGULATOR OF G-PROTEIN SIGNALING LOCO	Chr01	15880096	15912775	+

Gene Structure

More details in Jbrowse Sequence

CDS

Csp01G003680.1

ATGAGGATACAGGGGCAGCCTGAGGGTGCGAGGAGGCGTCTGGATTTAAATGCAGTCGGTGAGCTCAGGGGTGTGGAGCTCATCCGTGGCCGGGCAGGATATGGCTTTACTATTTCAGGACAGAGGCCGTGTCTGCTGAGCGGCATCATGGAAGGAAGCCCTGCACACCTGGTGGGACTCAAACAGGGGGATCACATCGTAGCTGTCAATGGAACTGATGTGTCCAATGCTTTGCATGAGACAGTGGTGCAGCTGATTGGAAGCTGCAAAGGACCCTTGCAGATGGTGGTGCATGCTAAAGGCAGAATCATGGGGAACCCCATCCTTCAGGATGCAAAATTTGGGATCGGCCAGAAAAGTGGTGTATTCCAAAAGGCAGGTGTTCTCCGTACTATCTCGGACGATTCAAGCAATTCCTCATTCAACTCACCTCATGCTTTCAACCCCAGACAGAGGCCGGTGTCAGAGCCTGATATGTCACAGTGGTCACAGCACTGGAACTCTTTAGCTGAGCAGCCAAAGGAGGAAACCTCCAGAGCTGGGGACACAGACTCTGTGTTTACAGACACAGAAGAAGCAAACTGGGGTAAATACTGGGGTATTTTAAATGTGACCTTGGTGGTGGGCTATCTGAGCTCAACAGAGCTGATTTTAAACACTAGAGAATCAGAGGAGGACTGTTTGAAAGCCATTCGAGAGCGAATACAACAGTTGGGAACAGAGCTGGATACCCATACACTGGTGATGATGAAAATTATGTGTGACTGCGTCCGACTTTGTGACGACACAGGAGCTGTCTTGGCAGCCTTTCCTACTGAGAATCTGGTTTTAGGGGCGGTGTGTGCTGAAGACCCGCGTTTCTTTTGCTTGGTCACTACGGCTCATATAACCAATGGCCACGTACCTGAGGACGGTCCTCTGCGGGCCTCCTGCCATGTTTTCTACATCGACCCAGAACTGGGAAAGCATGAGGACCACATAGGCATTGCAGGACGCTTTGGCTTTGACTGCACTCCAGATCCAGATGCCTTAGGCTGCCTGGAATTCCCCCAGACTCCCCTGGATGTTCTTCACTTCATCACAGTCCTGTACAGTGACATGGGGCAGGCTGTGGAGAGGCTTCGAACCAAACTGGATATGGAGGCTCAGCAGCTAGCCAAGGACAATGGCAGCACTGGTAAACAAGGCAGCAACAGCAGCAATGGGGATAGTGGTATTGGAAATGCATCCCCTCCTGAGGAAAGAGCGGACAGGGATTTCCCCTCTGCAATCCAAAACCCTCCTGGCGCCCACCTCCCCAGCTGTCCATGGGATTATCCCCTGGGCGAAGACCTCACCCCAGTAAACCTCTACCAGAACGGCCAAAGACTTAATTCAGAGAATAGTGCCAGCATACATTCCCTTTCAGAGTCACTACCTGGGCCCGATTGTCTTACTGGTTTCTATGGAGGTCCCCCACCCAGACTTGAATTCCAGTTTAAGCCCCCACCACCACCTCCTCTGCCTTTGGATAAAAAAGCAAACTTCTTTGGAGATCATCTTAGAAGTAGCCAAAGGTGGTTCTCAAAGGCAAAGAGGCCAAAAGCACTAAGTAGTGACCCTGAGTCTCAGGTGACGTCACACAGAAACTTACCCCTTCACAACTTGCCTCCCCCCATGAGCCAGATCCCCTCAGACAGGTACCCGTCGGCACATGTCATGATGCTCCCTCCCAAAGAGGAATGGACCAAAAGGTTTCTTGAGCAGAGAGAGAAACAGCGGAAGGATGCTAGTGCAAAAAATGGCTCCAGGTTTTGGGGTGTGGGTATTGTACGTGCCTCCAAACGCCGCTCGGCCAAACGTCTTAGCCTGGCACGATCACTGGATGACCTGGAGTCTGCTGCTTCCTCAGATGGTGAATATAGCGGAGTCCAGTTGCAGGGTTGCTGCAGTCAGAGCAGCCTGAACAGCAATGGCAGTCTTCCAGGAGCCGGAAGCCATCGAGGGGCCCAGGAGCAGAGCGTGGCCAGCTGGGCCGCCTGCTTCGAACGGCTCCTCCAGGATCCAGTGGGTGTGCGCTACTTCTCGGAATTTCTCAAGAAAGAATTCAGTGAGGAGAATATCTTGTTCTGGCAGGCCTGTGAATACTTCAGTCATGTCCCTGCAAATGATAAAAAGCAGCTGTCCCAGAGAGCTGGGGAGATCTACAACAGCTTCCTGTCCAGCAAGGCCACCATGCCTGTCAACATTGACAGCCAGGCCCAGCTGGCTGATGACGTCCTCACCTCGCCACGGCCCGACATGTTCAAGACGCAGCAGCTACAGATCTTCAACTTGATGAAGTTTGACAGTTATTCACGATTCCTCAAGTCGTCCCTTTACCAAGAGTGTATGCGTGCTGAGGTGGATGGCCGACCCTTGCCGGATCCTTACCAGATTCCATGCAGTCCCGCACCCTCGAAACATAGTGCCAGCTCCGACCGCTCAACACTTTCCACTCCAAAAAAGGAGGCTAGAAAGCAGAGGTCTGGGCGGTCACTGAACGACGACCCCAGAGATGAGAGTGCTGACAAGAAACGAGGCATCTTTTTCTCATGGTCCCGAAACAGGAGCTTCGGGAAGGGTCCAAAGAAGAAGGACGTTGGAGACATTGGCCTTGACTATTGGGGCAGTAATGGGCGAAGGGAGTCCCAGGGCTCTTTGTCGTCCGGTACCAGTCTGGAGATGCCCACTTCCTGCTCTGCTGGCAAGATTGAGTCTGATAATCGCCACTCAGTCGGAGCATGGGAACGCTCACCCAGACAGTGCAGTGTGATAATTCCAGACGGTTCGTGCTCTTCAATTACGCTCCGGCCCGGTGCCTCCATCAGGGAAGTCCTCCAAGATCTCTGTCACAATATCAACATTAACATCGCTGCTGTCGACCTCTTCCTGGTGGGAGGAGAGAAGCCTTTGGTGTTGGACCAAGACTGCTTGACCCTCAGCACACGAGACTTGAGAATGGAGAAGCGGACCCTCTTTAGATTGGACCTGGTTCCCATTAACCGCTCCGTGGGGTTGAAAGCCAAACCTACCAAACCAGTGACTGAGGTCCTGCGTCCCGTGGTGGCCAAATATGGCCTCCACCTTGGTGATCTTGTGGTCAAAGTAAATGGAGAAACTGAGCCTTTGGACCTGGGTGCCCCCATATCGAGTTTGGATGGCCTGCGTGTTGTGTTGGAGCGGGCAGACCTGGCTTCAAGTAAAGACAAATCCAAGTCTACCTCCCTGAAAGGCCACCCACCAACCAGGAGTTTCTCTGCTACAGGAGATGAGAGGTCAACACCAAAGGACTTTTCTGTGAGAGCAAGTGGACCAGACTCAGCACTCCCAGGGGAAATCAGAAAACAGAAAAAGATTAATATAGATGAAGCTGAAGAATTCTTTGAGCTCCTGAGCCGGGCACAGAGCGCCAGAGCCAACGACCAGCGTGGACTCCTCAGCAAAGAAGACCTGGTGCTTCCAGACTTTCTTCGACTAACTCCACCCAACCTGGCCTGCTCCACCCCTGACTCCTTGAAACAGACCCGGGAGAACGGTATCTCCTCACGGGGTGCCCTCACCTCTAACCTTCGCTCAGAGAGCCTGGACTCCTCCCTCAGCTCCAGTGCCAATGGACACTCAGGGACGAGGCGGTGCCTGTTGCCACCTTCTCGCCACCCAACTTTTGGCACCCACTTATCCCCCATCTCCCGGCCCCAAGACAACCGGCCAGGCCTCCGCACCGTGGAGGAGGACACCCACTCCGACTTGACCCTCGTGGGGGAGGGCGACATCAACAGCCCCAACAGCACCCTGCTGCCTCCATCACCATCCTCCATGCCGTCCCACGAGGGTAGCCTGCCTGAAGCCAACTTCACCCCACCAACACCCTGCTCCCAGTCTCAAGACGCAGGTGGAGAGGGAAAGTCCAGTGCAGAGGAAGGAACAGACCAAAGCTCAAACGCCAAATCCCCCACCGATAGAGCCGACACCGCACAGATGGTTCAGGAGGTGATGGATGTGGAGGGGGTGCATCTGGAGGAGGCGACGCACGAAACATCCCAGGGCGAGGACTCTGAGCTCAGCCTGAGCTTCCAGGGCTACGTGGCTGAGCTGCGACAGTGCCAGAGCAAGATGAGGAATGCCCAAATACCCCATAACGGCCGCAACCCACCAGACGGCAAGGACTGCACGACAGACCTTTACAAGGCCACGGTTGTCTGA

Transcript

Csp01G003680.1

ATGAGGATACAGGGGCAGCCTGAGGGTGCGAGGAGGCGTCTGGATTTAAATGCAGTCGGTGAGCTCAGGGGTGTGGAGCTCATCCGTGGCCGGGCAGGATATGGCTTTACTATTTCAGGACAGAGGCCGTGTCTGCTGAGCGGCATCATGGAAGGAAGCCCTGCACACCTGGTGGGACTCAAACAGGGGGATCACATCGTAGCTGTCAATGGAACTGATGTGTCCAATGCTTTGCATGAGACAGTGGTGCAGCTGATTGGAAGCTGCAAAGGACCCTTGCAGATGGTGGTGCATGCTAAAGGCAGAATCATGGGGAACCCCATCCTTCAGGATGCAAAATTTGGGATCGGCCAGAAAAGTGGTGTATTCCAAAAGGCAGGTGTTCTCCGTACTATCTCGGACGATTCAAGCAATTCCTCATTCAACTCACCTCATGCTTTCAACCCCAGACAGAGGCCGGTGTCAGAGCCTGATATGTCACAGTGGTCACAGCACTGGAACTCTTTAGCTGAGCAGCCAAAGGAGGAAACCTCCAGAGCTGGGGACACAGACTCTGTGTTTACAGACACAGAAGAAGCAAACTGGGGTAAATACTGGGgtattttaaatgtgacctTGGTGGTGGGCTATCTGAGCTCAACAGAGCTGATTTTAAACACTAGAGAATCAGAGGAGGACTGTTTGAAAGCCATTCGAGAGCGAATACAACAGTTGGGAACAGAGCTGGATACCCATACACTGGTGATGATGAAAATTATGTGTGACTGCGTCCGACTTTGTGACGACACAGGAGCTGTCTTGGCAGCCTTTCCTACTGAGAATCTGGTTTTAGGGGCGGTGTGTGCTGAAGACCCGCGTTTCTTTTGCTTGGTCACTACGGCTCATATAACCAATGGCCACGTACCTGAGGACGGTCCTCTGCGGGCCTCCTGCCATGTTTTCTACATCGACCCAGAACTGGGAAAGCATGAGGACCACATAGGCATTGCAGGACGCTTTGGCTTTGACTGCACTCCAGATCCAGATGCCTTAGGCTGCCTGGAATTCCCCCAGACTCCCCTGGATGTTCTTCACTTCATCACAGTCCTGTACAGTGACATGGGGCAGGCTGTGGAGAGGCTTCGAACCAAACTGGATATGGAGGCTCAGCAGCTAGCCAAGGACAATGGCAGCACTGGTAAACaaggcagcaacagcagcaatgGGGATAGTGGTATTGGAAATGCATCCCCTCCTGAGGAAAGAGCGGACAGGGATTTCCCCTCTGCAATCCAAAACCCTCCTGGCGCCCACCTCCCCAGCTGTCCATGGGATTATCCCCTGGGCGAAGACCTCACCCCAGTAAACCTCTACCAGAACGGCCAAAGACTTAATTCAGAGAATAGTGCCAGCATACATTCCCTTTCAGAGTCACTACCTGGGCCCGATTGTCTTACTGGTTTCTATGGAGGTCCCCCACCCAGACTTGAATTCCAGTTTAagcccccaccaccacctcctctgccTTTGGATAAAAAAGCAAACTTCTTTGGAGATCATCTTAGAAGTAGCCAAAGGTGGTTCTCAAAGGCAAAGAGGCCAAAAGCACTAAGTAGTGACCCTGAGTCTCAGGTGACGTCACACAGAAACTTACCCCTTCACAACTTGCCTCCCCCCATGAGCCAGATCCCCTCAGACAGGTACCCGTCGGCACATGTCATGATGCTCCCTCCCAAAGAGGAATGGACCAAAAGGTTTcttgagcagagagagaaacagcgGAAGGATGCTAGTGCAAAAAATGGCTCCAGGTTTTGGGGTGTGGGTATTGTACGTGCCTCCAAACGCCGCTCGGCCAAACGTCTTAGCCTGGCACGATCACTGGATGACCTGGAGTCTGCTGCTTCCTCAGATGGTGAATATAGCGGAGTCCAGTTGCAGGGTTGCTGCAGTCAGAGCAGCCTGAACAGCAATGGCAGTCTTCCAGGAGCCGGAAGCCATCGAGGGGCCCAGGAGCAGAGCGTGGCCAGCTGGGCCGCCTGCTTCGAACGGCTCCTCCAGGATCCAGTGGGTGTGCGCTACTTCTCGGAATTTCTCAAGAAAGAATTCAGTGAGGAGAATATCTTGTTCTGGCAGGCCTGTGAATACTTCAGTCATGTCCCTGCAAATGATAAAAAGCAGCTGTCCCAGAGAGCTGGGGAGATCTACAACAGCTTCCTGTCCAGCAAGGCCACCATGCCTGTCAACATTGACAGCCAGGCCCAGCTGGCTGATGACGTCCTCACCTCGCCACGGCCCGACATGTTCAAGACGCAGCAGCTACAGATCTTCAACTTGATGAAGTTTGACAGTTATTCACGATTCCTCAAGTCGTCCCTTTACCAAGAGTGTATGCGTGCTGAGGTGGATGGCCGACCCTTGCCGGATCCTTACCAGATTCCATGCAGTCCCGCACCCTCGAAACATAGTGCCAGCTCCGACCGCTCAACACTTTCCACTCCAAAAAAGGAGGCTAGAAAGCAGAGGTCTGGGCGGTCACTGAACGACGACCCCAGAGATGAGAGTGCTGACAAGAAACGAGGCATCTTTTTCTCATGGTCCCGAAACAGGAGCTTCGGGAAGGGTCCAAAGAAGAAGGACGTTGGAGACATTGGCCTTGACTATTGGGGCAGTAATGGGCGAAGGGAGTCCCAGGGCTCTTTGTCGTCCGGTACCAGTCTGGAGATGCCCACTTCCTGCTCTGCTGGCAAGATTGAGTCTGATAATCGCCACTCAGTCGGAGCATGGGAACGCTCACCCAGACAGTGCAGTGTGATAATTCCAGACGGTTCGTGCTCTTCAATTACGCTCCGGCCCGGTGCCTCCATCAGGGAAGTCCTCCAAGATCTCTGTCACAATATCAACATTAACATCGCTGCTGTCGACCTCTTCCTGGTGGGAGGAGAGAAGCCTTTGGTGTTGGACCAAGACTGCTTGACCCTCAGCACACGAGACTTGAGAATGGAGAAGCGGACCCTCTTTAGATTGGACCTGGTTCCCATTAACCGCTCCGTGGGGTTGAAAGCCAAACCTACCAAACCAGTGACTGAGGTCCTGCGTCCCGTGGTGGCCAAATATGGCCTCCACCTTGGTGATCTTGTGGTCAAAGTAaatggagaaactgagcctTTGGACCTGGGTGCCCCCATATCGAGTTTGGATGGCCTGCGTGTTGTGTTGGAGCGGGCAGACCTGGCTTCAAGTAAAGACAAATCCAAGTCTACCTCCCTGAAAGGCCACCCACCAACCAGGAGTTTCTCTGCTACAGGAGATGAGAGGTCAACACCAAAGGACTTTTCTGTGAGAGCAAGTGGACCAGACTCAGCACTCCCAGGGGaaatcagaaaacagaaaaagattAATATAGATGAAGCTGAAGAATTCTTTGAGCTCCTGAGCCGGGCACAGAGCGCCAGAGCCAACGACCAGCGTGGACTCCTCAGCAAAGAAGACCTGGTGCTTCCAGACTTTCTTCGACTAACTCCACCCAACCTGGCCTGCTCCACCCCTGACTCCTTGAAACAGACCCGGGAGAACGGTATCTCCTCACGGGGTGCCCTCACCTCTAACCTTCGCTCAGAGAGCCTGGACTCCTCCCTCAGCTCCAGTGCCAATGGACACTCAGGGACGAGGCGGTGCCTGTTGCCACCTTCTCGCCACCCAACTTTTGGCACCCACTTATCCCCCATCTCCCGGCCCCAAGACAACCGGCCAGGCCTCCGCACCGTGGAGGAGGACACCCACTCCGACTTGACCCTCGTGGGGGAGGGCGACATCAACAGCCCCAACAGCACCCTGCTGCCTCCATCACCATCCTCCATGCCGTCCCACGAGGGTAGCCTGCCTGAAGCCAACTTCACCCCACCAACACCCTGCTCCCAGTCTCAAGACGCAGGTGGAGAGGGAAAGTCCAGTGCAGAGGAAGGAACAGACCAAAGCTCAAACGCCAAATCCCCCACCGATAGAGCCGACACCGCACAGATGGTTCAGGAGGTGATGGATGTGGAGGGGGTGCATCTGGAGGAGGCGACGCACGAAACATCCCAGGGCGAGGACTCTGAGCTCAGCCTGAGCTTCCAGGGCTACGTGGCTGAGCTGCGACAGTGCCAGAGCAAGATGAGGAATGCCCAAATACCCCATAACGGCCGCAACCCACCAGACGGCAAGGACTGCACGACAGACCTTTACAAGGCCACGGTTGTCTGA

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00595	PDZ	PDZ domain	Domain	Interproscan
PF00615	RGS	Regulator of G protein signaling domain	Domain	Interproscan
PF02188	GoLoco	GoLoco motif	Motif	Interproscan
PF02196	RBD	Raf-like Ras-binding domain	Domain	Interproscan
PF16612	RGS12_usC	C-terminal unstructured region of RGS12	Disordered	Interproscan
PF16613	RGS12_us1	Unstructured region of RGS12	Disordered	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001478	Domain	PDZ domain	Interproscan
IPR003109	Conserved_site	GoLoco motif	Interproscan
IPR003116	Domain	Raf-like Ras-binding	Interproscan
IPR006020	Domain	PTB/PI domain	Interproscan
IPR016137	Domain	RGS domain	Interproscan
IPR024066	Homologous_superfamily	RGS, subdomain 1/3	Interproscan
IPR029071	Homologous_superfamily	Ubiquitin-like domain superfamily	Interproscan
IPR036034	Homologous_superfamily	PDZ superfamily	Interproscan
IPR036305	Homologous_superfamily	RGS domain superfamily	Interproscan
IPR037880	Domain	RGS12, RGS domain	Interproscan
IPR044926	Homologous_superfamily	RGS, subdomain 2	Interproscan
IPR046995	Family	Regulator of G-protein signaling 10/12/14-like	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45945	REGULATOR OF G-PROTEIN SIGNALING LOCO	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005096	Molecular Function	GTPase activator activity	Interproscan
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0005737	Cellular Component	cytoplasm	Interproscan
GO:0005886	Cellular Component	plasma membrane	Interproscan
GO:0007165	Biological Process	signal transduction	Interproscan
GO:0008277	Biological Process	regulation of G protein-coupled receptor signaling pathway	Interproscan
GO:0030695	Molecular Function	GTPase regulator activity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-